RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 CSDC2Q9Y534 153 aaKnown RBP2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 ALG6Q9Y672 507 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 KANK1Q14678 1352 aa2.36□□□□□ -2.03
HMGB1P9-201ENST00000429856 ATP10AO60312 1499 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 COL5A2P05997 1499 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 IGHV3OR16-10A0A075B7F0 116 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 IGHV4-30-2A0A087WSY4 118 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 IQCMA0A1B0GVH7 501 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 OR6C65A6NJZ3 312 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 ACOD1A6NK06 481 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 C11orf98E9PRG8 122 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 GOLGA8SH3BPF8 625 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 TFECO14948 347 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 PRKAB2O43741 272 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 TYROBPO43914 113 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 TPST2O60704 377 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 NDUFB10O96000 172 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 OTCP00480 354 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 PGK1P00558 417 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 HPP00738 406 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 NPPAP01160 153 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 KRT14P02533 472 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 HBQ1P09105 142 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 H2BFMP0C1H6 154 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 CT62P0C5K7 136 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 RHOXF2BP0C7M4 288 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 ACADSP16219 412 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 CD9P21926 228 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 CPN2P22792 545 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 ATP5A1P25705 553 aaKnown RBP2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 NMT1P30419 496 aaKnown RBP2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 BMI1P35226 326 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 HMGCLP35914 325 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 FDFT1P37268 417 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 CDKN1BP46527 198 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 QARSP47897 775 aaKnown RBP2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 SLC7A2P52569 658 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 CDH4P55283 916 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 ERVK-16P61578 105 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 CDK16Q00536 496 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 MS4A2Q01362 244 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 BDH1Q02338 343 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 RAB40BQ12829 278 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 KLRB1Q12918 225 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 IL18Q14116 193 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 WDR43Q15061 677 aaKnown RBP eCLIP2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 ISXQ2M1V0 245 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 C17orf58Q2M2W7 97 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 SNAI3Q3KNW1 292 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 KRTAP13-3Q3SY46 172 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 C14orf28Q4W4Y0 310 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 FBXO48Q5FWF7 155 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 C6orf226Q5I0X4 101 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 PIP5KL1Q5T9C9 394 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 TTC19Q6DKK2 380 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 SCYL2Q6P3W7 929 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 RNASEKQ6P5S7 137 aaKnown RBP2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 BZW1Q7L1Q6 419 aaKnown RBP2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 SH2D6Q7Z4S9 175 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 PAQR7Q86WK9 346 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 TRIM69Q86WT6 500 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 ZFAND4Q86XD8 727 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 HPS6Q86YV9 775 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 KATNAL2Q8IYT4 538 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 METTL4Q8N3J2 472 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 ZSCAN4Q8NAM6 433 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 SPATA4Q8NEY3 305 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 OR9A4Q8NGU2 314 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 ADAMTS16Q8TE57 1224 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 MCUR1Q96AQ8 359 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 ISG20Q96AZ6 181 aaKnown RBP2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 ZNF707Q96C28 371 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 CELF6Q96J87 481 aaKnown RBP2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 C7orf34Q96L11 122 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 IFT74Q96LB3 600 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 TECTBQ96PL2 329 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 FMO2Q99518 471 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 COPS8Q99627 209 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 HSD17B14Q9BPX1 270 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 C19orf43Q9BQ61 176 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 RHOXF2Q9BQY4 288 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 SIKE1Q9BRV8 207 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 SLC39A3Q9BRY0 314 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 FEM1AQ9BSK4 669 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 HAUS4Q9H6D7 363 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 MOB1AQ9H8S9 216 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 PAK1IP1Q9NWT1 392 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 GALPQ9UBC7 116 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 SLC2A6Q9UGQ3 507 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 MUTYHQ9UIF7 546 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 SPATA2Q9UM82 520 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 BARX2Q9UMQ3 279 aaPredicted RBP2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 OARD1Q9Y530 152 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 GMPPBQ9Y5P6 360 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 MAD1L1Q9Y6D9 718 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 COMMD3-BMI1R4GMX3 469 aa2.35□□□□□ -2.03
HMGB1P9-201ENST00000429856 TP53BP1Q12888 1972 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 FRMPD3Q5JV73 1810 aa2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P9-201ENST00000429856 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms