RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 EXTL2Q9UBQ6 330 aa8.07□□□□□ -1.12
GABPB1-205ENST00000429662 APOBEC3BQ9UH17 382 aaKnown RBP8.07□□□□□ -1.12
GABPB1-205ENST00000429662 ING4Q9UNL4 249 aa8.07□□□□□ -1.12
GABPB1-205ENST00000429662 GPR55Q9Y2T6 319 aaPredicted RBP8.07□□□□□ -1.12
GABPB1-205ENST00000429662 CHST2Q9Y4C5 530 aa8.07□□□□□ -1.12
GABPB1-205ENST00000429662 GPSM3Q9Y4H4 160 aa8.07□□□□□ -1.12
GABPB1-205ENST00000429662 SPACA6W5XKT8 324 aa8.07□□□□□ -1.12
GABPB1-205ENST00000429662 MGAQ8IWI9 3026 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 PCNX2A6NKB5 2137 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 MUC22E2RYF6 1773 aaPredicted RBP8.06□□□□□ -1.12
GABPB1-205ENST00000429662 KIAA1549LQ6ZVL6 1849 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 TRAV1-2A0A0B4J238 106 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 A0A1B0GTQ1 180 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 CD8B2A6NJW9 211 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 RIIAD1A6NNX1 92 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 C12orf71A8MTZ7 269 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 ISM1B1AKI9 464 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 PRR23D1E9PI22 279 aaPredicted RBP8.06□□□□□ -1.12
GABPB1-205ENST00000429662 K7ESF4 209 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 PPM1DO15297 605 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 MID1O15344 667 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 B3GALT2O43825 422 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 APOL3O95236 402 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 LALBAP00709 142 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 IFNGP01579 166 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 APODP05090 189 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 CEACAM5P06731 702 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 CHRM5P08912 532 aaPredicted RBP8.06□□□□□ -1.12
GABPB1-205ENST00000429662 PRR23D2P0DMB1 279 aaPredicted RBP8.06□□□□□ -1.12
GABPB1-205ENST00000429662 C8orf89P0DMQ9 161 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 SMIM10L1P0DMW3 83 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 CD8BP10966 210 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 ARSBP15848 533 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 SLC6A1P30531 599 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 RBM34P42696 430 aaKnown RBP8.06□□□□□ -1.12
GABPB1-205ENST00000429662 PITPNBP48739 271 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 EXOSC6Q5RKV6 272 aaKnown RBP8.06□□□□□ -1.12
GABPB1-205ENST00000429662 MANEAQ5SRI9 462 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 C6orf183Q5T699 404 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 IDNKQ5T6J7 187 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 STPG1Q5TH74 334 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 GARNL3Q5VVW2 1013 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 ZNF776Q68DI1 518 aaPredicted RBP8.06□□□□□ -1.12
GABPB1-205ENST00000429662 ZNF613Q6PF04 617 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 ZNF782Q6ZMW2 699 aaPredicted RBP8.06□□□□□ -1.12
GABPB1-205ENST00000429662 ZNF836Q6ZNA1 936 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 TMEM91Q6ZNR0 172 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 SHFQ7M4L6 423 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 OAFQ86UD1 273 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 AMIGO1Q86WK6 493 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 LURAP1LQ8IV03 231 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 TRIM48Q8IWZ4 208 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 CDRT4Q8N9R6 151 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 CAMKVQ8NCB2 501 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 OR5W2Q8NH69 310 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 ANGPTL6Q8NI99 470 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 TMEM239Q8WW34 195 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 SMIM10Q96HG1 83 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 SHDQ96IW2 340 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 FYTTD1Q96QD9 318 aaKnown RBP8.06□□□□□ -1.12
GABPB1-205ENST00000429662 SDF2Q99470 211 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 ZNF559Q9BR84 538 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 THAP7Q9BT49 309 aaPredicted RBP8.06□□□□□ -1.12
GABPB1-205ENST00000429662 TRMT61BQ9BVS5 477 aaKnown RBP8.06□□□□□ -1.12
GABPB1-205ENST00000429662 ZNF350Q9GZX5 532 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 HDHD2Q9H0R4 259 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 OR52D1Q9H346 318 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 RANBP3Q9H6Z4 567 aaPredicted RBP8.06□□□□□ -1.12
GABPB1-205ENST00000429662 TMEM27Q9HBJ8 222 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 EMC7Q9NPA0 242 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 EQTNQ9NQ60 294 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 CMC2Q9NRP2 79 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 SIDT1Q9NXL6 827 aaKnown RBP8.06□□□□□ -1.12
GABPB1-205ENST00000429662 EMC3Q9P0I2 261 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 ABRACLQ9P1F3 81 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 NLKQ9UBE8 527 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 ZNF223Q9UK11 482 aaPredicted RBP8.06□□□□□ -1.12
GABPB1-205ENST00000429662 SLC7A7Q9UM01 511 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 C19orf53Q9UNZ5 99 aaPredicted RBP8.06□□□□□ -1.12
GABPB1-205ENST00000429662 KCNK6Q9Y257 313 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 SLC35A3Q9Y2D2 325 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 MED31Q9Y3C7 131 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 NUBP2Q9Y5Y2 271 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 STON1Q9Y6Q2 735 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 USP9XQ93008 2570 aaPredicted RBP8.06□□□□□ -1.12
GABPB1-205ENST00000429662 MYOFQ9NZM1 2061 aa8.06□□□□□ -1.12
GABPB1-205ENST00000429662 SPTA1P02549 2419 aa8.05□□□□□ -1.12
GABPB1-205ENST00000429662 A0A0B4J293 547 aa8.05□□□□□ -1.12
GABPB1-205ENST00000429662 A8MV72 311 aaPredicted RBP8.05□□□□□ -1.12
GABPB1-205ENST00000429662 C4orf51C9J302 202 aa8.05□□□□□ -1.12
GABPB1-205ENST00000429662 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.05□□□□□ -1.12
GABPB1-205ENST00000429662 BHLHE40O14503 412 aa8.05□□□□□ -1.12
GABPB1-205ENST00000429662 SOCS6O14544 535 aa8.05□□□□□ -1.12
GABPB1-205ENST00000429662 TNFSF14O43557 240 aa8.05□□□□□ -1.12
GABPB1-205ENST00000429662 PLOD3O60568 738 aa8.05□□□□□ -1.12
GABPB1-205ENST00000429662 ZNF780AO75290 641 aaPredicted RBP8.05□□□□□ -1.12
GABPB1-205ENST00000429662 PRKRAO75569 313 aaKnown RBP8.05□□□□□ -1.12
GABPB1-205ENST00000429662 GATBO75879 557 aaKnown RBP8.05□□□□□ -1.12
GABPB1-205ENST00000429662 OR2B3O76000 313 aa8.05□□□□□ -1.12
GABPB1-205ENST00000429662 KAT7O95251 611 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms