RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 ARPC1BO15143 372 aaKnown RBP11.57□□□□□ -0.56
CDH3-202ENST00000429102 KDM4BO94953 1096 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 HMGN1P05114 100 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 FGF9P31371 208 aaPredicted RBP11.57□□□□□ -0.56
CDH3-202ENST00000429102 PPM1AP35813 382 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 SELENOPP49908 381 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 PGDP52209 483 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 BTN1A1Q13410 526 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 GNA13Q14344 377 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 IRF4Q15306 451 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 LGALS14Q8TCE9 139 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 IL21RQ9HBE5 538 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 KCMF1Q9P0J7 381 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 MARK1Q9P0L2 795 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 AP1M2Q9Y6Q5 423 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 ALPK3Q96L96 1907 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 LGALS8O00214 317 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 VEGFDO43915 354 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 PDGFAP04085 211 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 F3P13726 295 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 DRD2P14416 443 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 SNTA1Q13424 505 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 SLC48A1Q6P1K1 146 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 C11orf88Q6PI97 169 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 DUSP18Q8NEJ0 188 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 OR4N2Q8NGD1 307 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 THAP4Q8WY91 577 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 PAWRQ96IZ0 340 aaKnown RBP11.57□□□□□ -0.56
CDH3-202ENST00000429102 HS6ST2Q96MM7 605 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 ACTRT3Q9BYD9 372 aa11.57□□□□□ -0.56
CDH3-202ENST00000429102 C1QTNF3-AMACRE9PGA6 284 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 BLOC1S5-TXNDC5H3BN57 136 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 CISD3P0C7P0 127 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 SLC6A1P30531 599 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 BMP8BP34820 402 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 EXOSC2Q13868 293 aaKnown RBP11.56□□□□□ -0.56
CDH3-202ENST00000429102 ESCO2Q56NI9 601 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 HBMQ6B0K9 141 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 ALKAL2Q6UX46 152 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 MBOAT2Q6ZWT7 520 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 FCRLAQ7L513 359 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 BMP8AQ7Z5Y6 402 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 POGLUT1Q8NBL1 392 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 OR2L5Q8NG80 312 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 OR2L3Q8NG85 312 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 OR52B4Q8NGK2 314 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 OR8S1Q8NH09 359 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 CNOT9Q92600 299 aaKnown RBP11.56□□□□□ -0.56
CDH3-202ENST00000429102 VWCEQ96DN2 955 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 IL20Q9NYY1 176 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 NDOR1Q9UHB4 597 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 GPR34Q9UPC5 381 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 SPAG17Q6Q759 2223 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 EDDM13A0A1B0GTR0 161 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 H7C1C5 153 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 SLC19A2O60779 497 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 CXCL10P02778 98 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 ANXA7P20073 488 aaKnown RBP11.56□□□□□ -0.56
CDH3-202ENST00000429102 HTR2AP28223 471 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 STAT5AP42229 794 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 AKR1D1P51857 326 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 LCN6P62502 163 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 YOD1Q5VVQ6 348 aaPredicted RBP11.56□□□□□ -0.56
CDH3-202ENST00000429102 NIPAL3Q6P499 406 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 ENPP7Q6UWV6 458 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 LRRC28Q86X40 367 aaPredicted RBP11.56□□□□□ -0.56
CDH3-202ENST00000429102 OR2T4Q8NH00 348 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 RPLP0P6Q8NHW5 317 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 C1orf216Q8TAB5 229 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 GINS4Q9BRT9 223 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 MRPS2Q9Y399 296 aaKnown RBP11.56□□□□□ -0.56
CDH3-202ENST00000429102 IER3IP1Q9Y5U9 82 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 LOC100509620A0A075B734 347 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 C17orf113A0A1B0GUU1 675 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 IRGMA1A4Y4 181 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 LILRB3O75022 631 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 TRAPPC2P0DI81 140 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 TRAPPC2BP0DI82 140 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 ACTR1BP42025 376 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 ACTR1AP61163 376 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 SHC2P98077 582 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 ZBTB37Q5TC79 503 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 TEX261Q6UWH6 196 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 Q6ZTK2 550 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 GALNT11Q8NCW6 608 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 MS4A7Q9GZW8 240 aaPredicted RBP11.56□□□□□ -0.56
CDH3-202ENST00000429102 NIPAL2Q9H841 368 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 PELI2Q9HAT8 420 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 PRSS16Q9NQE7 514 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 POT1Q9NUX5 634 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 CLDND1Q9NY35 253 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 HCN3Q9P1Z3 774 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 ING1Q9UK53 422 aaPredicted RBP11.56□□□□□ -0.56
CDH3-202ENST00000429102 U3KQ87 197 aa11.56□□□□□ -0.56
CDH3-202ENST00000429102 SELENOFO60613 162 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 CLEC3AO75596 197 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 GDNFP39905 211 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 PER3P56645 1201 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 KIAA1024LP59773 190 aa11.55□□□□□ -0.56
CDH3-202ENST00000429102 CREB3L2Q70SY1 520 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms