RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 GSNP06396 782 aa16.4■□□□□ 0.22
PSPC1-202ENST00000427943 PGRP06401 933 aa16.4■□□□□ 0.22
PSPC1-202ENST00000427943 THBDP07204 575 aa16.4■□□□□ 0.22
PSPC1-202ENST00000427943 PABPC4LP0CB38 370 aaKnown RBP16.4■□□□□ 0.22
PSPC1-202ENST00000427943 PGM1P36871 562 aa16.4■□□□□ 0.22
PSPC1-202ENST00000427943 ADAM8P78325 824 aa16.4■□□□□ 0.22
PSPC1-202ENST00000427943 HPCAP84074 193 aa16.4■□□□□ 0.22
PSPC1-202ENST00000427943 MERTKQ12866 999 aa16.4■□□□□ 0.22
PSPC1-202ENST00000427943 RNPS1Q15287 305 aaKnown RBP16.4■□□□□ 0.22
PSPC1-202ENST00000427943 TIGD2Q4W5G0 525 aa16.4■□□□□ 0.22
PSPC1-202ENST00000427943 TMEM201Q5SNT2 666 aa16.4■□□□□ 0.22
PSPC1-202ENST00000427943 ATG16L1Q676U5 607 aa16.4■□□□□ 0.22
PSPC1-202ENST00000427943 GTF2IRD2BQ6EKJ0 949 aa16.4■□□□□ 0.22
PSPC1-202ENST00000427943 BEND4Q6ZU67 534 aa16.4■□□□□ 0.22
PSPC1-202ENST00000427943 EIF3MQ7L2H7 374 aaKnown RBP16.4■□□□□ 0.22
PSPC1-202ENST00000427943 GTF2IRD2Q86UP8 949 aa16.4■□□□□ 0.22
PSPC1-202ENST00000427943 STK32CQ86UX6 486 aa16.4■□□□□ 0.22
PSPC1-202ENST00000427943 LSRQ86X29 649 aaPredicted RBP16.4■□□□□ 0.22
PSPC1-202ENST00000427943 TUSC5Q8IXB3 177 aa16.4■□□□□ 0.22
PSPC1-202ENST00000427943 ZNF619Q8N2I2 560 aa16.4■□□□□ 0.22
PSPC1-202ENST00000427943 OR5B2Q96R09 309 aa16.4■□□□□ 0.22
PSPC1-202ENST00000427943 OR52E6Q96RD3 313 aa16.4■□□□□ 0.22
PSPC1-202ENST00000427943 TMBIM4Q9HC24 238 aa16.4■□□□□ 0.22
PSPC1-202ENST00000427943 POLE3Q9NRF9 147 aa16.4■□□□□ 0.22
PSPC1-202ENST00000427943 KLHL13Q9P2N7 655 aa16.4■□□□□ 0.22
PSPC1-202ENST00000427943 ACANP16112 2415 aa16.4■□□□□ 0.22
PSPC1-202ENST00000427943 SETD2Q9BYW2 2564 aaPredicted RBP16.39■□□□□ 0.22
PSPC1-202ENST00000427943 CCDC154A6NI56 674 aa16.39■□□□□ 0.21
PSPC1-202ENST00000427943 CLDN24A6NM45 220 aa16.39■□□□□ 0.21
PSPC1-202ENST00000427943 ETV2O00321 342 aaPredicted RBP16.39■□□□□ 0.21
PSPC1-202ENST00000427943 HMGN4O00479 90 aa16.39■□□□□ 0.21
PSPC1-202ENST00000427943 PGCP20142 388 aa16.39■□□□□ 0.21
PSPC1-202ENST00000427943 ENPP1P22413 925 aa16.39■□□□□ 0.21
PSPC1-202ENST00000427943 LOXP28300 417 aaPredicted RBP16.39■□□□□ 0.21
PSPC1-202ENST00000427943 SESN3P58005 492 aa16.39■□□□□ 0.21
PSPC1-202ENST00000427943 CHRNEQ04844 493 aa16.39■□□□□ 0.21
PSPC1-202ENST00000427943 SYPL1Q16563 259 aa16.39■□□□□ 0.21
PSPC1-202ENST00000427943 SLC9B1Q4ZJI4 515 aa16.39■□□□□ 0.21
PSPC1-202ENST00000427943 BEND6Q5SZJ8 279 aaPredicted RBP16.39■□□□□ 0.21
PSPC1-202ENST00000427943 TFAP2EQ6VUC0 442 aa16.39■□□□□ 0.21
PSPC1-202ENST00000427943 DNAJC14Q6Y2X3 702 aaPredicted RBP16.39■□□□□ 0.21
PSPC1-202ENST00000427943 ZNF621Q6ZSS3 439 aa16.39■□□□□ 0.21
PSPC1-202ENST00000427943 PLEKHM3Q6ZWE6 761 aa16.39■□□□□ 0.21
PSPC1-202ENST00000427943 MAVSQ7Z434 540 aa16.39■□□□□ 0.21
PSPC1-202ENST00000427943 FAM71CQ8NEG0 241 aa16.39■□□□□ 0.21
PSPC1-202ENST00000427943 RAB3IL1Q8TBN0 382 aa16.39■□□□□ 0.21
PSPC1-202ENST00000427943 PNPT1Q8TCS8 783 aaKnown RBP16.39■□□□□ 0.21
PSPC1-202ENST00000427943 ST8SIA1Q92185 356 aa16.39■□□□□ 0.21
PSPC1-202ENST00000427943 ZG16BQ96DA0 208 aa16.39■□□□□ 0.21
PSPC1-202ENST00000427943 ZBTB18Q99592 522 aa16.39■□□□□ 0.21
PSPC1-202ENST00000427943 ACTR6Q9GZN1 396 aa16.39■□□□□ 0.21
PSPC1-202ENST00000427943 SAP130Q9H0E3 1048 aa16.39■□□□□ 0.21
PSPC1-202ENST00000427943 MANSC1Q9H8J5 431 aa16.39■□□□□ 0.21
PSPC1-202ENST00000427943 SLC35A3Q9Y2D2 325 aa16.39■□□□□ 0.21
PSPC1-202ENST00000427943 VPS13CQ709C8 3753 aa16.38■□□□□ 0.21
PSPC1-202ENST00000427943 DNAJA2O60884 412 aa16.38■□□□□ 0.21
PSPC1-202ENST00000427943 PRKD3O94806 890 aa16.38■□□□□ 0.21
PSPC1-202ENST00000427943 RYKP34925 604 aa16.38■□□□□ 0.21
PSPC1-202ENST00000427943 SLC18A1P54219 525 aa16.38■□□□□ 0.21
PSPC1-202ENST00000427943 PLAURQ03405 335 aa16.38■□□□□ 0.21
PSPC1-202ENST00000427943 TSC22D1Q15714 1073 aa16.38■□□□□ 0.21
PSPC1-202ENST00000427943 COX20Q5RI15 118 aa16.38■□□□□ 0.21
PSPC1-202ENST00000427943 CXorf67Q86X51 503 aaPredicted RBP16.38■□□□□ 0.21
PSPC1-202ENST00000427943 WFDC8Q8IUA0 241 aa16.38■□□□□ 0.21
PSPC1-202ENST00000427943 TRIML2Q8N7C3 387 aa16.38■□□□□ 0.21
PSPC1-202ENST00000427943 ANKFN1Q8N957 763 aa16.38■□□□□ 0.21
PSPC1-202ENST00000427943 WFDC11Q8NEX6 87 aa16.38■□□□□ 0.21
PSPC1-202ENST00000427943 ZNF563Q8TA94 476 aa16.38■□□□□ 0.21
PSPC1-202ENST00000427943 TMEM234Q8WY98 164 aa16.38■□□□□ 0.21
PSPC1-202ENST00000427943 DNAJA3Q96EY1 480 aa16.38■□□□□ 0.21
PSPC1-202ENST00000427943 FANCFQ9NPI8 374 aa16.38■□□□□ 0.21
PSPC1-202ENST00000427943 ACER3Q9NUN7 267 aa16.38■□□□□ 0.21
PSPC1-202ENST00000427943 BEX4Q9NWD9 120 aaPredicted RBP16.38■□□□□ 0.21
PSPC1-202ENST00000427943 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.37■□□□□ 0.21
PSPC1-202ENST00000427943 SLCO1B7G3V0H7 640 aa16.37■□□□□ 0.21
PSPC1-202ENST00000427943 SMAD9O15198 467 aaKnown RBP16.37■□□□□ 0.21
PSPC1-202ENST00000427943 CHRM4P08173 479 aa16.37■□□□□ 0.21
PSPC1-202ENST00000427943 GUSBP08236 651 aa16.37■□□□□ 0.21
PSPC1-202ENST00000427943 PPP3CBP16298 524 aa16.37■□□□□ 0.21
PSPC1-202ENST00000427943 RAC3P60763 192 aa16.37■□□□□ 0.21
PSPC1-202ENST00000427943 ALKBH2Q6NS38 261 aa16.37■□□□□ 0.21
PSPC1-202ENST00000427943 ARL8AQ96BM9 186 aa16.37■□□□□ 0.21
PSPC1-202ENST00000427943 MAELQ96JY0 434 aaKnown RBP16.37■□□□□ 0.21
PSPC1-202ENST00000427943 ZNF300Q96RE9 604 aaPredicted RBP16.37■□□□□ 0.21
PSPC1-202ENST00000427943 PSD2Q9BQI7 771 aa16.37■□□□□ 0.21
PSPC1-202ENST00000427943 SLC38A1Q9H2H9 487 aa16.37■□□□□ 0.21
PSPC1-202ENST00000427943 CTPS2Q9NRF8 586 aa16.37■□□□□ 0.21
PSPC1-202ENST00000427943 SERINC1Q9NRX5 453 aa16.37■□□□□ 0.21
PSPC1-202ENST00000427943 SLC6A13Q9NSD5 602 aa16.37■□□□□ 0.21
PSPC1-202ENST00000427943 KLF4O43474 513 aa16.36■□□□□ 0.21
PSPC1-202ENST00000427943 ADAM11O75078 769 aa16.36■□□□□ 0.21
PSPC1-202ENST00000427943 GCM2O75603 506 aaPredicted RBP16.36■□□□□ 0.21
PSPC1-202ENST00000427943 FESP07332 822 aa16.36■□□□□ 0.21
PSPC1-202ENST00000427943 TFPIP10646 304 aa16.36■□□□□ 0.21
PSPC1-202ENST00000427943 IDO1P14902 403 aa16.36■□□□□ 0.21
PSPC1-202ENST00000427943 PSMB1P20618 241 aaKnown RBP16.36■□□□□ 0.21
PSPC1-202ENST00000427943 DIO1P49895 249 aa16.36■□□□□ 0.21
PSPC1-202ENST00000427943 ANXA11P50995 505 aaKnown RBP16.36■□□□□ 0.21
PSPC1-202ENST00000427943 KCNJ10P78508 379 aa16.36■□□□□ 0.21
PSPC1-202ENST00000427943 PDCD4Q53EL6 469 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms