RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 ZNF395Q9H8N7 513 aaPredicted RBP9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 LTB4R2Q9NPC1 389 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 MYEF2Q9P2K5 600 aaKnown RBP9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 PCTPQ9UKL6 214 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 CCDC187A0A096LP49 1063 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 PMS2P1A4D2B8 440 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 CD8B2A6NJW9 211 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 SUSD5O60279 629 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 CSO75390 466 aaKnown RBP9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 CLEC3BP05452 202 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 C1SP09871 688 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 CD8BP10966 210 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 CDK4P11802 303 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 CNR2P34972 360 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 ERVK-25P63136 954 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 IGDCC3Q8IVU1 814 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 ENDOVQ8N8Q3 282 aaKnown RBP9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 CD200R1Q8TD46 325 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 CNOT9Q92600 299 aaKnown RBP9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 RIMS3Q9UJD0 308 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 LRRC42Q9Y546 428 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 R4GN57 208 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 AURKAO14965 403 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 EEDO75530 441 aaKnown RBP9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 S100PP25815 95 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 ZXDBP98169 803 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 DYRK1AQ13627 763 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 ZMAT1Q5H9K5 638 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 GARNL3Q5VVW2 1013 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 ADAMTSL4Q6UY14 1074 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 OR5D14Q8NGL3 314 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 EVA1AQ9H8M9 152 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 GNB4Q9HAV0 340 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 CUEDC1Q9NWM3 386 aaPredicted RBP9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 A6NHS1 94 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 AGAP5A6NIR3 686 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 M0R3H8 397 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 PRICKLE3O43900 615 aaPredicted RBP9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 PTAFRP25105 342 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 TACR3P29371 465 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 EDDM3BP56851 147 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 SQSTM1Q13501 440 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 ZNF813Q6ZN06 617 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 ZNF574Q6ZN55 896 aaPredicted RBP9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 SCML4Q8N228 414 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 TMEM130Q8N3G9 435 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 OR5D16Q8NGK9 328 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 CRYGNQ8WXF5 182 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 ELF4Q99607 663 aaPredicted RBP9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 TMEM45AQ9NWC5 275 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 ZNF337Q9Y3M9 751 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 NAV1Q8NEY1 1877 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 DCDC2BA2VCK2 349 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 CRYABP02511 175 aaKnown RBP9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 CX3CR1P49238 355 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 GPR50Q13585 617 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 NKAIN1Q4KMZ8 207 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 TMEM135Q86UB9 458 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 C11orf40Q8WZ69 217 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 FIZ1Q96SL8 496 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 SPIN2AQ99865 258 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 SPIN2BQ9BPZ2 258 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 PRDM9Q9NQV7 894 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 IL37Q9NZH6 218 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 FBXO4Q9UKT5 387 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 PPT2Q9UMR5 302 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 HS3ST2Q9Y278 367 aa9.3□□□□□ -0.92
CLTCL1-202ENST00000427926 MYH6P13533 1939 aa9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 C17orf113A0A1B0GUU1 675 aa9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 MROH6A6NGR9 719 aa9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 CASC3O15234 703 aaKnown RBP9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 KNG1P01042 644 aa9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 RRAS2P62070 204 aaPredicted RBP9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 DEFA5Q01523 94 aa9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 MICAQ29983 383 aa9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 C1orf220Q5T0J3 134 aa9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 TMEM244Q5VVB8 128 aa9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 KANK2Q63ZY3 851 aa9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 TP53INP2Q8IXH6 220 aa9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 SDR9C7Q8NEX9 313 aa9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 HAVCR2Q8TDQ0 301 aa9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 HDAC2Q92769 488 aaKnown RBP9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 MAL2Q969L2 176 aa9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 ZMYND19Q96E35 227 aaPredicted RBP9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 B3GAT1Q9P2W7 334 aa9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 TRAPPC2LQ9UL33 140 aa9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 B3GNT3Q9Y2A9 372 aa9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 NUP98P52948 1817 aa9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 SH2D7A6NKC9 451 aaPredicted RBP9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 MPLP40238 635 aa9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 KIAA1024LP59773 190 aa9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 PPIAP62937 165 aaKnown RBP9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 ARL16Q0P5N6 197 aa9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 FAM57BQ71RH2 274 aa9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 ETFBKMTQ8IXQ9 262 aa9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 CYB561A3Q8NBI2 242 aa9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 SLC37A3Q8NCC5 494 aa9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 ZNF480Q8WV37 535 aa9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 TAAR8Q969N4 342 aa9.29□□□□□ -0.92
CLTCL1-202ENST00000427926 RSPRY1Q96DX4 576 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms