RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 RDH16O75452 317 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 LIPCP11150 499 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 PCBP4P57723 403 aaKnown RBP12.41□□□□□ -0.42
USP42-203ENST00000426246 GPR176Q14439 515 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 FAAH2Q6GMR7 532 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 KANSL1Q7Z3B3 1105 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 GPR155Q7Z3F1 870 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 ZAR1Q86SH2 424 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 IL17RCQ8NAC3 791 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 BPIFA2Q96DR5 249 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 LINC00615Q96LM1 132 aaPredicted RBP12.41□□□□□ -0.42
USP42-203ENST00000426246 AICDAQ9GZX7 198 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 TMEM27Q9HBJ8 222 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 TRIM36Q9NQ86 728 aa12.41□□□□□ -0.42
USP42-203ENST00000426246 SIDT1Q9NXL6 827 aaKnown RBP12.41□□□□□ -0.42
USP42-203ENST00000426246 CACNA1EQ15878 2313 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 TRBV2A0A0J9YWF9 115 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 TEX13CA0A0J9YWL9 993 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 CDHR4A6H8M9 788 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 C11orf98E9PRG8 122 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 B3GALT2O43825 422 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 RNGTTO60942 597 aaKnown RBP12.4□□□□□ -0.42
USP42-203ENST00000426246 MAS1P04201 325 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 TSPAN31Q12999 210 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 RDH10Q8IZV5 341 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 GDPD1Q8N9F7 314 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 OR5J2Q8NH18 312 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 ACOT11Q8WXI4 607 aaPredicted RBP12.4□□□□□ -0.42
USP42-203ENST00000426246 SLC25A36Q96CQ1 311 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 AUNIPQ9H7T9 357 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 FKRPQ9H9S5 495 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 HRASLS2Q9NWW9 162 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 ITGB1BP2Q9UKP3 347 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 CDV3Q9UKY7 258 aaKnown RBP12.4□□□□□ -0.42
USP42-203ENST00000426246 ICKQ9UPZ9 632 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 EXOSC1Q9Y3B2 195 aaKnown RBP12.4□□□□□ -0.42
USP42-203ENST00000426246 IER3IP1Q9Y5U9 82 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 MUC3AQ02505 3323 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 A0A1B0GTH9 108 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 EGFP01133 1207 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 COL9A1P20849 921 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 GNG2P59768 71 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 OR1Q1Q15612 314 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 ADAMTSL4Q6UY14 1074 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 ZNF511Q8NB15 262 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 TMEM239Q8WW34 195 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 PEX11GQ96HA9 241 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 DERL3Q96Q80 235 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 ELF4Q99607 663 aaPredicted RBP12.4□□□□□ -0.42
USP42-203ENST00000426246 FKBP14Q9NWM8 211 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 ING4Q9UNL4 249 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 LSM2Q9Y333 95 aaKnown RBP12.4□□□□□ -0.42
USP42-203ENST00000426246 MED31Q9Y3C7 131 aa12.4□□□□□ -0.42
USP42-203ENST00000426246 A0A1W2PPV9 198 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 B4DGG1 531 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 MRPS14O60783 128 aaKnown RBP12.39□□□□□ -0.43
USP42-203ENST00000426246 F13BP05160 661 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 CPEP16870 476 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 GABRA5P31644 462 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 PPP2CBP62714 309 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 ERVK-25P63136 954 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 PPP2CAP67775 309 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 RPE65Q16518 533 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 ZNF836Q6ZNA1 936 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 NRROSQ86YC3 692 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 LRRC56Q8IYG6 542 aaPredicted RBP12.39□□□□□ -0.43
USP42-203ENST00000426246 C1orf216Q8TAB5 229 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 CEP76Q8TAP6 659 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 RBM18Q96H35 190 aaKnown RBP12.39□□□□□ -0.43
USP42-203ENST00000426246 HSPA12BQ96MM6 686 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 HHIPQ96QV1 700 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 ACTRT3Q9BYD9 372 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 ULBP3Q9BZM4 244 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 RBFOX1Q9NWB1 397 aaKnown RBP12.39□□□□□ -0.43
USP42-203ENST00000426246 SLC23A1Q9UHI7 598 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 GPR34Q9UPC5 381 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 A0A0G2JPF8 293 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 HNRNPCL3B7ZW38 293 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 HNRNPCL4P0DMR1 293 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 C5AR1P21730 350 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 REEP5Q00765 189 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 GALK2Q01415 458 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 ZNF613Q6PF04 617 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 ZNF322Q6U7Q0 402 aaPredicted RBP12.39□□□□□ -0.43
USP42-203ENST00000426246 RFPL4BQ6ZWI9 263 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 TAF8Q7Z7C8 310 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 ASPGQ86U10 573 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 MORN4Q8NDC4 146 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 OR9A4Q8NGU2 314 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 OR2T35Q8NGX2 323 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 AKAP1Q92667 903 aaKnown RBP eCLIP12.39□□□□□ -0.43
USP42-203ENST00000426246 NMNAT3Q96T66 252 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 FUZQ9BT04 418 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 KCNN2Q9H2S1 579 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 SYNDIG1Q9H7V2 258 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 BABAM2Q9NXR7 383 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 ZNF443Q9Y2A4 671 aaPredicted RBP12.39□□□□□ -0.43
USP42-203ENST00000426246 A0A087WV48 116 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 C2CD4DB7Z1M9 353 aa12.39□□□□□ -0.43
USP42-203ENST00000426246 RNF13O43567 381 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms