RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 SNTB1Q13884 538 aaKnown RBP16.54■□□□□ 0.24
MSH5-207ENST00000425703 TMEM176BQ3YBM2 270 aaPredicted RBP16.54■□□□□ 0.24
MSH5-207ENST00000425703 C3orf33Q6P1S2 294 aa16.54■□□□□ 0.24
MSH5-207ENST00000425703 OR6K3Q8NGY3 331 aa16.54■□□□□ 0.24
MSH5-207ENST00000425703 PAIP1Q9H074 479 aaKnown RBP16.54■□□□□ 0.24
MSH5-207ENST00000425703 GP6Q9HCN6 339 aa16.54■□□□□ 0.24
MSH5-207ENST00000425703 ELOVL5Q9NYP7 299 aa16.54■□□□□ 0.24
MSH5-207ENST00000425703 PCDHB14Q9Y5E9 798 aa16.54■□□□□ 0.24
MSH5-207ENST00000425703 GMEB1Q9Y692 573 aa16.54■□□□□ 0.24
MSH5-207ENST00000425703 DSPPQ9NZW4 1301 aa16.53■□□□□ 0.24
MSH5-207ENST00000425703 A6NNC1 897 aa16.53■□□□□ 0.24
MSH5-207ENST00000425703 EDF1O60869 148 aaKnown RBP16.53■□□□□ 0.24
MSH5-207ENST00000425703 PLGP00747 810 aaPredicted RBP16.53■□□□□ 0.24
MSH5-207ENST00000425703 DBIP07108 87 aaKnown RBP16.53■□□□□ 0.24
MSH5-207ENST00000425703 TFPTP0C1Z6 253 aa16.53■□□□□ 0.24
MSH5-207ENST00000425703 HOXB9P17482 250 aaPredicted RBP16.53■□□□□ 0.24
MSH5-207ENST00000425703 FKBP2P26885 142 aaKnown RBP16.53■□□□□ 0.24
MSH5-207ENST00000425703 SHC1P29353 583 aa16.53■□□□□ 0.24
MSH5-207ENST00000425703 APOBEC1P41238 236 aaKnown RBP16.53■□□□□ 0.24
MSH5-207ENST00000425703 CRISP3P54108 245 aa16.53■□□□□ 0.24
MSH5-207ENST00000425703 DSTNP60981 165 aa16.53■□□□□ 0.24
MSH5-207ENST00000425703 FADDQ13158 208 aa16.53■□□□□ 0.24
MSH5-207ENST00000425703 SQLEQ14534 574 aa16.53■□□□□ 0.24
MSH5-207ENST00000425703 MAPK11Q15759 364 aa16.53■□□□□ 0.24
MSH5-207ENST00000425703 ZNF239Q16600 458 aaKnown RBP16.53■□□□□ 0.24
MSH5-207ENST00000425703 LRIF1Q5T3J3 769 aa16.53■□□□□ 0.24
MSH5-207ENST00000425703 SLC2A7Q6PXP3 512 aa16.53■□□□□ 0.24
MSH5-207ENST00000425703 TMEM200AQ86VY9 491 aa16.53■□□□□ 0.24
MSH5-207ENST00000425703 PEX5LQ8IYB4 626 aa16.53■□□□□ 0.24
MSH5-207ENST00000425703 ARFGAP2Q8N6H7 521 aa16.53■□□□□ 0.24
MSH5-207ENST00000425703 SLC25A43Q8WUT9 341 aaPredicted RBP16.53■□□□□ 0.24
MSH5-207ENST00000425703 SPDL1Q96EA4 605 aa16.53■□□□□ 0.24
MSH5-207ENST00000425703 REXO5Q96IC2 774 aaKnown RBP16.53■□□□□ 0.24
MSH5-207ENST00000425703 DACH2Q96NX9 599 aa16.53■□□□□ 0.24
MSH5-207ENST00000425703 SLC39A3Q9BRY0 314 aa16.53■□□□□ 0.24
MSH5-207ENST00000425703 QRSL1Q9H0R6 528 aaKnown RBP16.53■□□□□ 0.24
MSH5-207ENST00000425703 SLC52A3Q9NQ40 469 aa16.53■□□□□ 0.24
MSH5-207ENST00000425703 PLSCR4Q9NRQ2 329 aa16.53■□□□□ 0.24
MSH5-207ENST00000425703 SERINC1Q9NRX5 453 aa16.53■□□□□ 0.24
MSH5-207ENST00000425703 PROCRQ9UNN8 238 aa16.53■□□□□ 0.24
MSH5-207ENST00000425703 TMEM247A6NEH6 219 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 FAAHO00519 579 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 BMP2P12643 396 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 ETFAP13804 333 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 IL7RP16871 459 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 SLC7A1P30825 629 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 CD79BP40259 229 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 CTBP2P56545 445 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 RAC3P60763 192 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 SIRPAP78324 504 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 PLAURQ03405 335 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 RNPS1Q15287 305 aaKnown RBP16.52■□□□□ 0.24
MSH5-207ENST00000425703 RGNQ15493 299 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 ZSWIM7Q19AV6 140 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 GTDC1Q4AE62 458 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 PRAMEF8Q5VWM4 474 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 PRAMEF7Q5VXH5 474 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 PPP4R4Q6NUP7 873 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 ZNF474Q6S9Z5 364 aaPredicted RBP16.52■□□□□ 0.24
MSH5-207ENST00000425703 PLEKHM3Q6ZWE6 761 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 GRINAQ7Z429 371 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 RNF128Q8TEB7 428 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 SLC38A5Q8WUX1 472 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 WDR60Q8WVS4 1066 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 AURKBQ96GD4 344 aaPredicted RBP16.52■□□□□ 0.24
MSH5-207ENST00000425703 COQ10BQ9H8M1 238 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 RASSF1Q9NS23 344 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 DNAJB12Q9NXW2 375 aaKnown RBP16.52■□□□□ 0.24
MSH5-207ENST00000425703 CCDC167Q9P0B6 97 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 TRIM33Q9UPN9 1127 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 SPIN1Q9Y657 262 aaPredicted RBP16.52■□□□□ 0.24
MSH5-207ENST00000425703 SPG11Q96JI7 2443 aa16.52■□□□□ 0.24
MSH5-207ENST00000425703 CCDC168Q8NDH2 2452 aa16.52■□□□□ 0.23
MSH5-207ENST00000425703 CLIC1O00299 241 aa16.51■□□□□ 0.23
MSH5-207ENST00000425703 BCAS1O75363 584 aaPredicted RBP16.51■□□□□ 0.23
MSH5-207ENST00000425703 PPIBP23284 216 aaKnown RBP16.51■□□□□ 0.23
MSH5-207ENST00000425703 CPOXP36551 454 aa16.51■□□□□ 0.23
MSH5-207ENST00000425703 HTR3AP46098 478 aa16.51■□□□□ 0.23
MSH5-207ENST00000425703 MERTKQ12866 999 aa16.51■□□□□ 0.23
MSH5-207ENST00000425703 CDH24Q86UP0 819 aa16.51■□□□□ 0.23
MSH5-207ENST00000425703 ZNF440Q8IYI8 595 aa16.51■□□□□ 0.23
MSH5-207ENST00000425703 SLC43A2Q8N370 569 aa16.51■□□□□ 0.23
MSH5-207ENST00000425703 ZNF563Q8TA94 476 aa16.51■□□□□ 0.23
MSH5-207ENST00000425703 LINC01560Q8TB33 94 aa16.51■□□□□ 0.23
MSH5-207ENST00000425703 CNOT9Q92600 299 aaKnown RBP16.51■□□□□ 0.23
MSH5-207ENST00000425703 CCDC106Q9BWC9 280 aa16.51■□□□□ 0.23
MSH5-207ENST00000425703 SRXN1Q9BYN0 137 aa16.51■□□□□ 0.23
MSH5-207ENST00000425703 OPN3Q9H1Y3 402 aaPredicted RBP16.51■□□□□ 0.23
MSH5-207ENST00000425703 ZNF446Q9NWS9 450 aa16.51■□□□□ 0.23
MSH5-207ENST00000425703 NDRG3Q9UGV2 375 aa16.51■□□□□ 0.23
MSH5-207ENST00000425703 A0A0G2JPF8 293 aa16.5■□□□□ 0.23
MSH5-207ENST00000425703 A0A1W2PP18 115 aa16.5■□□□□ 0.23
MSH5-207ENST00000425703 CLDN24A6NM45 220 aa16.5■□□□□ 0.23
MSH5-207ENST00000425703 HNRNPCL2B2RXH8 293 aa16.5■□□□□ 0.23
MSH5-207ENST00000425703 HNRNPCL3B7ZW38 293 aa16.5■□□□□ 0.23
MSH5-207ENST00000425703 NR5A2O00482 541 aa16.5■□□□□ 0.23
MSH5-207ENST00000425703 HNRNPCL1O60812 293 aaKnown RBP16.5■□□□□ 0.23
MSH5-207ENST00000425703 BCHEP06276 602 aa16.5■□□□□ 0.23
MSH5-207ENST00000425703 HNRNPCL4P0DMR1 293 aa16.5■□□□□ 0.23
MSH5-207ENST00000425703 UQCRBP14927 111 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms