RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 SAGP10523 405 aaPredicted RBP24.29■■□□□ 1.48
LDB1-202ENST00000425280 PAPD4Q6PIY7 484 aaKnown RBP24.29■■□□□ 1.48
LDB1-202ENST00000425280 C9orf43Q8TAL5 461 aaPredicted RBP24.29■■□□□ 1.48
LDB1-202ENST00000425280 PMEPA1Q969W9 287 aa24.29■■□□□ 1.48
LDB1-202ENST00000425280 C3orf49Q96BT1 292 aa24.29■■□□□ 1.48
LDB1-202ENST00000425280 FBXO8Q9NRD0 319 aa24.29■■□□□ 1.48
LDB1-202ENST00000425280 SIGLEC7Q9Y286 467 aa24.29■■□□□ 1.48
LDB1-202ENST00000425280 COL27A1Q8IZC6 1860 aaPredicted RBP24.28■■□□□ 1.48
LDB1-202ENST00000425280 A0A087WUJ7 227 aa24.28■■□□□ 1.48
LDB1-202ENST00000425280 CCNA2P20248 432 aa24.28■■□□□ 1.48
LDB1-202ENST00000425280 PNLIPRP2P54317 469 aa24.28■■□□□ 1.48
LDB1-202ENST00000425280 M0R082 166 aa24.28■■□□□ 1.48
LDB1-202ENST00000425280 NR4A1P22736 598 aa24.28■■□□□ 1.48
LDB1-202ENST00000425280 NCF4Q15080 339 aa24.28■■□□□ 1.48
LDB1-202ENST00000425280 TMEM205Q6UW68 189 aa24.28■■□□□ 1.48
LDB1-202ENST00000425280 CPEB2Q7Z5Q1 589 aaKnown RBP24.28■■□□□ 1.48
LDB1-202ENST00000425280 CYP4Z2PQ8N1L4 340 aa24.28■■□□□ 1.48
LDB1-202ENST00000425280 TMCO5AQ8N6Q1 288 aa24.28■■□□□ 1.48
LDB1-202ENST00000425280 TP53INP1Q96A56 240 aa24.28■■□□□ 1.48
LDB1-202ENST00000425280 CRELD1Q96HD1 420 aa24.28■■□□□ 1.48
LDB1-202ENST00000425280 TMEM80Q96HE8 168 aa24.28■■□□□ 1.48
LDB1-202ENST00000425280 MED17Q9NVC6 651 aa24.28■■□□□ 1.48
LDB1-202ENST00000425280 WDR87Q6ZQQ6 2873 aa24.27■■□□□ 1.48
LDB1-202ENST00000425280 KDM4EB2RXH2 506 aaPredicted RBP24.27■■□□□ 1.48
LDB1-202ENST00000425280 PTP4A3O75365 173 aa24.27■■□□□ 1.48
LDB1-202ENST00000425280 RCBTB2O95199 551 aa24.27■■□□□ 1.48
LDB1-202ENST00000425280 CCR4P51679 360 aa24.27■■□□□ 1.48
LDB1-202ENST00000425280 CRYZQ08257 329 aaKnown RBP24.27■■□□□ 1.48
LDB1-202ENST00000425280 CTF1Q16619 201 aa24.27■■□□□ 1.48
LDB1-202ENST00000425280 WBP2NLQ6ICG8 309 aa24.27■■□□□ 1.48
LDB1-202ENST00000425280 RPL13AP3Q6NVV1 102 aa24.27■■□□□ 1.48
LDB1-202ENST00000425280 OR52L1Q8NGH7 329 aa24.27■■□□□ 1.48
LDB1-202ENST00000425280 PRODHO43272 600 aa24.26■■□□□ 1.47
LDB1-202ENST00000425280 HMGN1P05114 100 aa24.26■■□□□ 1.47
LDB1-202ENST00000425280 TGFBR2P37173 567 aa24.26■■□□□ 1.47
LDB1-202ENST00000425280 TIGD6Q17RP2 521 aa24.26■■□□□ 1.47
LDB1-202ENST00000425280 FAM199XQ6PEV8 388 aaPredicted RBP24.26■■□□□ 1.47
LDB1-202ENST00000425280 THSD4Q6ZMP0 1018 aa24.26■■□□□ 1.47
LDB1-202ENST00000425280 MARCH3Q86UD3 253 aa24.26■■□□□ 1.47
LDB1-202ENST00000425280 ANKK1Q8NFD2 765 aa24.26■■□□□ 1.47
LDB1-202ENST00000425280 PLEKHA8Q96JA3 519 aa24.26■■□□□ 1.47
LDB1-202ENST00000425280 LAT2Q9GZY6 243 aa24.26■■□□□ 1.47
LDB1-202ENST00000425280 ICAM5Q9UMF0 924 aa24.26■■□□□ 1.47
LDB1-202ENST00000425280 KMT2EQ8IZD2 1858 aa24.26■■□□□ 1.47
LDB1-202ENST00000425280 TRAV27A0A087WT01 109 aa24.26■■□□□ 1.47
LDB1-202ENST00000425280 A0A1W2PQD3 144 aa24.26■■□□□ 1.47
LDB1-202ENST00000425280 ALG1L2C9J202 215 aa24.26■■□□□ 1.47
LDB1-202ENST00000425280 BHLHE40O14503 412 aa24.26■■□□□ 1.47
LDB1-202ENST00000425280 GABARAPO95166 117 aa24.26■■□□□ 1.47
LDB1-202ENST00000425280 SLC2A10O95528 541 aa24.26■■□□□ 1.47
LDB1-202ENST00000425280 BMP7P18075 431 aa24.26■■□□□ 1.47
LDB1-202ENST00000425280 NFATC3Q12968 1075 aa24.26■■□□□ 1.47
LDB1-202ENST00000425280 SMARCD3Q6STE5 483 aa24.26■■□□□ 1.47
LDB1-202ENST00000425280 C16orf47Q6ZP98 133 aaPredicted RBP24.26■■□□□ 1.47
LDB1-202ENST00000425280 C8orf44Q96CB5 159 aa24.26■■□□□ 1.47
LDB1-202ENST00000425280 LPAR4Q99677 370 aa24.26■■□□□ 1.47
LDB1-202ENST00000425280 KLHDC3Q9BQ90 382 aa24.26■■□□□ 1.47
LDB1-202ENST00000425280 WDR54Q9H977 334 aa24.26■■□□□ 1.47
LDB1-202ENST00000425280 HCN1O60741 890 aa24.25■■□□□ 1.47
LDB1-202ENST00000425280 LIPAP38571 399 aa24.25■■□□□ 1.47
LDB1-202ENST00000425280 PSPHP78330 225 aa24.25■■□□□ 1.47
LDB1-202ENST00000425280 ZNF117Q03924 483 aa24.25■■□□□ 1.47
LDB1-202ENST00000425280 AQP6Q13520 282 aa24.25■■□□□ 1.47
LDB1-202ENST00000425280 P2RY8Q86VZ1 359 aa24.25■■□□□ 1.47
LDB1-202ENST00000425280 OR51A7Q8NH64 312 aa24.25■■□□□ 1.47
LDB1-202ENST00000425280 ZNF524Q96C55 264 aa24.25■■□□□ 1.47
LDB1-202ENST00000425280 VMP1Q96GC9 406 aa24.25■■□□□ 1.47
LDB1-202ENST00000425280 GPR179Q6PRD1 2367 aa24.25■■□□□ 1.47
LDB1-202ENST00000425280 CYC1P08574 325 aa24.25■■□□□ 1.47
LDB1-202ENST00000425280 CCKBRP32239 447 aa24.25■■□□□ 1.47
LDB1-202ENST00000425280 FHL1Q13642 323 aa24.25■■□□□ 1.47
LDB1-202ENST00000425280 FAM69BQ5VUD6 431 aa24.25■■□□□ 1.47
LDB1-202ENST00000425280 ZFAND2BQ8WV99 257 aa24.25■■□□□ 1.47
LDB1-202ENST00000425280 SH3YL1Q96HL8 342 aaPredicted RBP24.25■■□□□ 1.47
LDB1-202ENST00000425280 LRFN5Q96NI6 719 aa24.25■■□□□ 1.47
LDB1-202ENST00000425280 SLC39A1Q9NY26 324 aa24.25■■□□□ 1.47
LDB1-202ENST00000425280 A0A0C4DFX4 3053 aa24.24■■□□□ 1.47
LDB1-202ENST00000425280 KLK3P07288 261 aaPredicted RBP24.24■■□□□ 1.47
LDB1-202ENST00000425280 CD36P16671 472 aa24.24■■□□□ 1.47
LDB1-202ENST00000425280 GRK5P34947 590 aa24.24■■□□□ 1.47
LDB1-202ENST00000425280 AADACL4Q5VUY2 407 aa24.24■■□□□ 1.47
LDB1-202ENST00000425280 ZNF367Q7RTV3 350 aa24.24■■□□□ 1.47
LDB1-202ENST00000425280 ATG4DQ86TL0 474 aaPredicted RBP24.24■■□□□ 1.47
LDB1-202ENST00000425280 OAFQ86UD1 273 aa24.24■■□□□ 1.47
LDB1-202ENST00000425280 LNX2Q8N448 690 aa24.24■■□□□ 1.47
LDB1-202ENST00000425280 OR52I1Q8NGK6 324 aa24.24■■□□□ 1.47
LDB1-202ENST00000425280 NUBPLQ8TB37 319 aa24.24■■□□□ 1.47
LDB1-202ENST00000425280 OR5M11Q96RB7 305 aa24.24■■□□□ 1.47
LDB1-202ENST00000425280 TNFRSF13CQ96RJ3 184 aa24.24■■□□□ 1.47
LDB1-202ENST00000425280 BCL7BQ9BQE9 202 aa24.24■■□□□ 1.47
LDB1-202ENST00000425280 TBL1XR1Q9BZK7 514 aa24.24■■□□□ 1.47
LDB1-202ENST00000425280 ULBP3Q9BZM4 244 aa24.24■■□□□ 1.47
LDB1-202ENST00000425280 ZBTB20Q9HC78 741 aaPredicted RBP24.24■■□□□ 1.47
LDB1-202ENST00000425280 C19orf25Q9UFG5 118 aaPredicted RBP24.24■■□□□ 1.47
LDB1-202ENST00000425280 GPN3Q9UHW5 284 aaPredicted RBP24.24■■□□□ 1.47
LDB1-202ENST00000425280 TRBV11-1A0A0K0K1C0 115 aa24.23■■□□□ 1.47
LDB1-202ENST00000425280 CDX4O14627 284 aaPredicted RBP24.23■■□□□ 1.47
LDB1-202ENST00000425280 NDUFB5O43674 189 aa24.23■■□□□ 1.47
LDB1-202ENST00000425280 CD59P13987 128 aa24.23■■□□□ 1.47
LDB1-202ENST00000425280 MST1P26927 711 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms