RNA–Protein interactions for RNA: ENST00000421922.6

CCDC28B-202, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 1 (best) BASIC

Gene CCDC28B, Length 1,415 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-202ENST00000421922 PNMTP11086 282 aa15.62■□□□□ 0.09
CCDC28B-202ENST00000421922 DAPP51397 102 aa15.62■□□□□ 0.09
CCDC28B-202ENST00000421922 ZNF41P51814 821 aaPredicted RBP15.62■□□□□ 0.09
CCDC28B-202ENST00000421922 ALDH6A1Q02252 535 aaKnown RBP15.62■□□□□ 0.09
CCDC28B-202ENST00000421922 SEC23BQ15437 767 aa15.62■□□□□ 0.09
CCDC28B-202ENST00000421922 OR5M10Q6IEU7 315 aa15.62■□□□□ 0.09
CCDC28B-202ENST00000421922 FAHD1Q6P587 224 aa15.62■□□□□ 0.09
CCDC28B-202ENST00000421922 TTC33Q6PID6 262 aaPredicted RBP15.62■□□□□ 0.09
CCDC28B-202ENST00000421922 ISLR2Q6UXK2 745 aa15.62■□□□□ 0.09
CCDC28B-202ENST00000421922 NKAIN4Q8IVV8 208 aa15.62■□□□□ 0.09
CCDC28B-202ENST00000421922 CDK20Q8IZL9 346 aa15.62■□□□□ 0.09
CCDC28B-202ENST00000421922 DHRSXQ8N5I4 330 aa15.62■□□□□ 0.09
CCDC28B-202ENST00000421922 TMEM255BQ8WV15 326 aa15.62■□□□□ 0.09
CCDC28B-202ENST00000421922 RNF138Q8WVD3 245 aa15.62■□□□□ 0.09
CCDC28B-202ENST00000421922 TMEM239Q8WW34 195 aa15.62■□□□□ 0.09
CCDC28B-202ENST00000421922 GTPBP3Q969Y2 492 aaKnown RBP15.62■□□□□ 0.09
CCDC28B-202ENST00000421922 DTNBP1Q96EV8 351 aa15.62■□□□□ 0.09
CCDC28B-202ENST00000421922 RIBC2Q9H4K1 309 aa15.62■□□□□ 0.09
CCDC28B-202ENST00000421922 LRFN1Q9P244 771 aa15.62■□□□□ 0.09
CCDC28B-202ENST00000421922 PRDM4Q9UKN5 801 aa15.62■□□□□ 0.09
CCDC28B-202ENST00000421922 ICAM5Q9UMF0 924 aa15.62■□□□□ 0.09
CCDC28B-202ENST00000421922 WASF3Q9UPY6 502 aa15.62■□□□□ 0.09
CCDC28B-202ENST00000421922 MED31Q9Y3C7 131 aa15.62■□□□□ 0.09
CCDC28B-202ENST00000421922 WDFY3Q8IZQ1 3526 aa15.62■□□□□ 0.09
CCDC28B-202ENST00000421922 A0A087WUU8 490 aa15.61■□□□□ 0.09
CCDC28B-202ENST00000421922 CDK2AP1O14519 115 aa15.61■□□□□ 0.09
CCDC28B-202ENST00000421922 RRP8O43159 456 aaKnown RBP15.61■□□□□ 0.09
CCDC28B-202ENST00000421922 ADAM11O75078 769 aa15.61■□□□□ 0.09
CCDC28B-202ENST00000421922 ACADSP16219 412 aa15.61■□□□□ 0.09
CCDC28B-202ENST00000421922 WT1P19544 449 aaPredicted RBP15.61■□□□□ 0.09
CCDC28B-202ENST00000421922 RBM34P42696 430 aaKnown RBP15.61■□□□□ 0.09
CCDC28B-202ENST00000421922 SLC1A3P43003 542 aa15.61■□□□□ 0.09
CCDC28B-202ENST00000421922 GAS1P54826 345 aa15.61■□□□□ 0.09
CCDC28B-202ENST00000421922 TPD52P55327 224 aaPredicted RBP15.61■□□□□ 0.09
CCDC28B-202ENST00000421922 QPRTQ15274 297 aa15.61■□□□□ 0.09
CCDC28B-202ENST00000421922 ZIK1Q3SY52 487 aaPredicted RBP15.61■□□□□ 0.09
CCDC28B-202ENST00000421922 BROXQ5VW32 411 aa15.61■□□□□ 0.09
CCDC28B-202ENST00000421922 KDM4DQ6B0I6 523 aa15.61■□□□□ 0.09
CCDC28B-202ENST00000421922 MBOAT2Q6ZWT7 520 aa15.61■□□□□ 0.09
CCDC28B-202ENST00000421922 GNPDA2Q8TDQ7 276 aa15.61■□□□□ 0.09
CCDC28B-202ENST00000421922 JSRP1Q96MG2 331 aaPredicted RBP15.61■□□□□ 0.09
CCDC28B-202ENST00000421922 ADI1Q9BV57 179 aa15.61■□□□□ 0.09
CCDC28B-202ENST00000421922 ANGPTL4Q9BY76 406 aa15.61■□□□□ 0.09
CCDC28B-202ENST00000421922 MED11Q9P086 117 aa15.61■□□□□ 0.09
CCDC28B-202ENST00000421922 TMEM5Q9Y2B1 443 aa15.61■□□□□ 0.09
CCDC28B-202ENST00000421922 AP4B1Q9Y6B7 739 aa15.61■□□□□ 0.09
CCDC28B-202ENST00000421922 KPNA4O00629 521 aaPredicted RBP15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 GNB5O14775 395 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 EFSO43281 561 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 SNX4O95219 450 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 SNAP29O95721 258 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 POU2F1P14859 743 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 CBLP22681 906 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 CXCR1P25024 350 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 PTGDSP41222 190 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 CCL11P51671 97 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 SOX8P57073 446 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 MERTKQ12866 999 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 ZNF468Q5VIY5 522 aaPredicted RBP15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 CCDC81Q6ZN84 652 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 RNF113BQ8IZP6 322 aaKnown RBP15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 PSD4Q8NDX1 1056 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 GPR119Q8TDV5 335 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 ST8SIA1Q92185 356 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 C3orf49Q96BT1 292 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 FUZQ9BT04 418 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 UCK2Q9BZX2 261 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 DSN1Q9H410 356 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 TOR3AQ9H497 397 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 MED13Q9UHV7 2174 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 EML6Q6ZMW3 1958 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 ZFYVE26Q68DK2 2539 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 IGLV3-32A0A0A0MS00 114 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 C7orf72A4D263 438 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 ANKRD33BA6NCL7 494 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 C17orf51A8MQB3 221 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 SLC25A12O75746 678 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 F10P00742 488 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 THY1P04216 161 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 PTNP21246 168 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 GSTM3P21266 225 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 FUT4P22083 530 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 HTR3AP46098 478 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 TUBA3CQ13748 450 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 C6orf52Q5T4I8 152 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 TTC23Q5W5X9 447 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 ANKRD34AQ69YU3 496 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 PGBD2Q6P3X8 592 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 TUBA3EQ6PEY2 450 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 GRINAQ7Z429 371 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 PLCZ1Q86YW0 608 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 NRMQ8IXM6 262 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 OR1J4Q8NGS1 313 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 DGCR6LQ9BY27 220 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 C12orf10Q9HB07 376 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 SH2D2AQ9NP31 389 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 TMEFF2Q9UIK5 374 aaPredicted RBP15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 LRRC42Q9Y546 428 aa15.6■□□□□ 0.09
CCDC28B-202ENST00000421922 A0A087WUJ7 227 aa15.59■□□□□ 0.09
CCDC28B-202ENST00000421922 G3V3Y1 287 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms