RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 TFAP2CQ92754 450 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 C3orf49Q96BT1 292 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 UBL7Q96S82 380 aaPredicted RBP13□□□□□ -0.33
SHMT1P1-201ENST00000419974 FEVQ99581 238 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 BARD1Q99728 777 aaKnown RBP13□□□□□ -0.33
SHMT1P1-201ENST00000419974 TMEM43Q9BTV4 400 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 GABARAPL3Q9BY60 117 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 ING2Q9H160 280 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 METTL7AQ9H8H3 244 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 PROK2Q9HC23 129 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 KRCC1Q9NPI7 259 aaPredicted RBP13□□□□□ -0.33
SHMT1P1-201ENST00000419974 POFUT2Q9Y2G5 429 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 MAGED1Q9Y5V3 778 aaPredicted RBP13□□□□□ -0.33
SHMT1P1-201ENST00000419974 ATRXP46100 2492 aa13□□□□□ -0.33
SHMT1P1-201ENST00000419974 A0A087WZY1 265 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 SLC16A6O15403 523 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 KLF4O43474 513 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 NTN1O95631 604 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 ACADSP16219 412 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 CDH2P19022 906 aaPredicted RBP12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 FUT4P22083 530 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 FKBP2P26885 142 aaKnown RBP12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 TMPRSS3P57727 454 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 HOXC5Q00444 222 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 ALDH6A1Q02252 535 aaKnown RBP12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 SEC23BQ15437 767 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 ALG10BQ5I7T1 473 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 AGAP7PQ5VUJ5 663 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 ISLR2Q6UXK2 745 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 IL20RBQ6UXL0 311 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 ATG4DQ86TL0 474 aaPredicted RBP12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 ZNF227Q86WZ6 799 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 HS3ST5Q8IZT8 346 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 BEST3Q8N1M1 668 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 OR4K5Q8NGD3 323 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 OR52J3Q8NH60 311 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 LIPHQ8WWY8 451 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 TMEM234Q8WY98 164 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 HAS2Q92819 552 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 DTNBP1Q96EV8 351 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 CRELD1Q96HD1 420 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 AGAP4Q96P64 663 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 PRR14Q9BWN1 585 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 KLRF1Q9NZS2 232 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 RHCGQ9UBD6 479 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 SLC7A7Q9UM01 511 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 C15orf41Q9Y2V0 281 aa12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 MRPS18CQ9Y3D5 142 aaKnown RBP12.99□□□□□ -0.33
SHMT1P1-201ENST00000419974 EXPH5Q8NEV8 1989 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 OIP5O43482 229 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 TRIM3O75382 744 aaPredicted RBP12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 NEURL1O76050 574 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 GSTM3P21266 225 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 PRKACGP22612 351 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 IGFBP5P24593 272 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 FPR3P25089 353 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 ITGA3P26006 1051 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 MST1P26927 711 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 ADH6P28332 368 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 CASRP41180 1078 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 OMPP47874 163 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 IDH2P48735 452 aaKnown RBP12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 ESRRGP62508 458 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 ADARB1P78563 741 aaKnown RBP12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 PRKCDQ05655 676 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 MERTKQ12866 999 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 MFAP5Q13361 173 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 SLC36A3Q495N2 470 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 GLYR1Q49A26 553 aaPredicted RBP12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 FGD3Q5JSP0 725 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 ZNF468Q5VIY5 522 aaPredicted RBP12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 TTC23Q5W5X9 447 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 B3GNTL1Q67FW5 361 aaPredicted RBP12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 FCRLBQ6BAA4 426 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 PGBD2Q6P3X8 592 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 C5orf46Q6UWT4 87 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 TMPRSS11FQ6ZWK6 438 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 GRINAQ7Z429 371 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 ZER1Q7Z7L7 766 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 PLCZ1Q86YW0 608 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 NKAIN4Q8IVV8 208 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 CYP4Z2PQ8N1L4 340 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 GALNT4Q8N4A0 578 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 SIRT6Q8N6T7 355 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 CLDN22Q8N7P3 220 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 ATG16L2Q8NAA4 619 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 TMEM239Q8WW34 195 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 ANKRD60Q9BZ19 345 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 Q9H521 79 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 ZNF552Q9H707 407 aaPredicted RBP12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 ZNF556Q9HAH1 456 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 SMURF2Q9HAU4 748 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 SELENONQ9NZV5 590 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 TMEM5Q9Y2B1 443 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 ORC6Q9Y5N6 252 aa12.98□□□□□ -0.33
SHMT1P1-201ENST00000419974 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.97□□□□□ -0.33
SHMT1P1-201ENST00000419974 MASP2O00187 686 aa12.97□□□□□ -0.33
SHMT1P1-201ENST00000419974 SNPHO15079 494 aa12.97□□□□□ -0.33
SHMT1P1-201ENST00000419974 KLK10O43240 276 aa12.97□□□□□ -0.33
SHMT1P1-201ENST00000419974 FZD7O75084 574 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms