RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 ZDHHC11BP0C7U3 371 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 VPREB1P12018 145 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 GNSP15586 552 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 SPI1P17947 270 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 TNNI1P19237 187 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 ATP6V1B2P21281 511 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 PTBP1P26599 531 aaKnown RBP eCLIP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 ALDH4A1P30038 563 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 SHMT2P34897 504 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 CTNNB1P35222 781 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 ELK3P41970 407 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 CCR10P46092 362 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 POU3F4P49335 361 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 RPL14P50914 215 aaKnown RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 TKTL1P51854 596 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 KPNA2P52292 529 aaKnown RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 LIMK1P53667 647 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 ATXN3P54252 364 aaPredicted RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 NAPAP54920 295 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 MFAP4P55083 255 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 CDH13P55290 713 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 TAS2R60P59551 318 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 RRAS2P62070 204 aaPredicted RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 NCS1P62166 190 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 RPS18P62269 152 aaKnown RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 SNRPEP62304 92 aaKnown RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 HERVK_113P63132 956 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 KCNJ10P78508 379 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 GTF2BQ00403 316 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 DEFA6Q01524 100 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 EMX1Q04741 257 aaPredicted RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 CSTF1Q05048 431 aaKnown RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 PRKG2Q13237 762 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 TRAM2Q15035 370 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 PON3Q15166 354 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 CYP51A1Q16850 503 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 CDNFQ49AH0 187 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 KLHL26Q53HC5 615 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 FBXO48Q5FWF7 155 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 TFDP3Q5H9I0 405 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 COQ5Q5HYK3 327 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 PABPC1L2AQ5JQF8 200 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 GLRA4Q5JXX5 417 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 CDKL4Q5MAI5 379 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 PLEKHS1Q5SXH7 462 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 PDZK1Q5T2W1 519 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 LCN1P1Q5VSP4 162 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 BHLHB9Q6PI77 547 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 KDELC1Q6UW63 502 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 PLXDC2Q6UX71 529 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 TMPRSS11AQ6ZMR5 421 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 RASSF6Q6ZTQ3 369 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 EIF3MQ7L2H7 374 aaKnown RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 HSD17B13Q7Z5P4 300 aaPredicted RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 PTAR1Q7Z6K3 402 aaPredicted RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 MYPOPQ86VE0 399 aaPredicted RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 COMTD1Q86VU5 262 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 C10orf107Q8IVU9 208 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 FAM71AQ8IYT1 594 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 ATPAF2Q8N5M1 289 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 LRRC17Q8N6Y2 441 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 RNF148Q8N7C7 305 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 STPG4Q8N801 248 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 OR6C4Q8NGE1 309 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 OR10V1Q8NGI7 309 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 RAET1EQ8TD07 263 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 HEXDCQ8WVB3 486 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 ZNF606Q8WXB4 792 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 CREB3L1Q96BA8 519 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 FAM120BQ96EK7 910 aaKnown RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 ALG14Q96F25 216 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 MRPL48Q96GC5 212 aaKnown RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 PRMT6Q96LA8 375 aaPredicted RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 ERMAPQ96PL5 475 aaPredicted RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 P2RY13Q9BPV8 354 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 CHCHD6Q9BRQ6 235 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 CCM2Q9BSQ5 444 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 COPS4Q9BT78 406 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 PAPOLGQ9BWT3 736 aaKnown RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 RTN4RQ9BZR6 473 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 ZNF436Q9C0F3 470 aaPredicted RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 C20orf27Q9GZN8 174 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 IL22Q9GZX6 179 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 DNTTIP1Q9H147 329 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 ALX4Q9H161 411 aaPredicted RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 PPIL3Q9H2H8 161 aaKnown RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 TDRD3Q9H7E2 651 aaKnown RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 NT5DC2Q9H857 520 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 DBNDD1Q9H9R9 158 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 APOBEC3GQ9HC16 384 aaKnown RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 CHMP1AQ9HD42 196 aaPredicted RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 EQTNQ9NQ60 294 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 GSN-AS1Q9NRJ2 163 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 TBC1D22BQ9NU19 505 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 IMP3Q9NV31 184 aaKnown RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 SDHAF2Q9NX18 166 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 THUMPD1Q9NXG2 353 aaKnown RBP3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 TMOD3Q9NYL9 352 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 MED11Q9P086 117 aa3.05□□□□□ -1.92
SDCBPP3-201ENST00000419629 PAK5Q9P286 719 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms