RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 TMEM239Q8WW34 195 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 TMEM234Q8WY98 164 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 ZG16BQ96DA0 208 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 FAM46AQ96IP4 442 aaKnown RBP5.46□□□□□ -1.54
HMGB3-202ENST00000419110 IMMP1LQ96LU5 166 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 HS6ST2Q96MM7 605 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 RASL10BQ96S79 203 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 BARD1Q99728 777 aaKnown RBP5.46□□□□□ -1.54
HMGB3-202ENST00000419110 NIPSNAP1Q9BPW8 284 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 OCSTAMPQ9BR26 566 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 MESP1Q9BRJ9 268 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 FUZQ9BT04 418 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 LAT2Q9GZY6 243 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 AKIRIN1Q9H9L7 192 aaPredicted RBP5.46□□□□□ -1.54
HMGB3-202ENST00000419110 C12orf10Q9HB07 376 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 VCX3AQ9NNX9 186 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 SDHAF3Q9NRP4 125 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 FAM118AQ9NWS6 357 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 HPF1Q9NWY4 346 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 P4HTMQ9NXG6 502 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 FLRT3Q9NZU0 649 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 TEKT2Q9UIF3 430 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 MYRFQ9Y2G1 1151 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 NTNG1Q9Y2I2 539 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 YARS2Q9Y2Z4 477 aaKnown RBP5.46□□□□□ -1.54
HMGB3-202ENST00000419110 WIF1Q9Y5W5 379 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 CDH10Q9Y6N8 788 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 HSPE1-MOB4S4R3N1 261 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 PCNX3Q9H6A9 2034 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 DMDP11532 3685 aa5.46□□□□□ -1.54
HMGB3-202ENST00000419110 ZFHX2Q9C0A1 2572 aaPredicted RBP5.45□□□□□ -1.54
HMGB3-202ENST00000419110 NCKAP5O14513 1909 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 A0A087WUU8 490 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 ANKUB1A6NFN9 424 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 ENO4A6NNW6 628 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 MPZL2O60487 215 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 BCAS1O75363 584 aaPredicted RBP5.45□□□□□ -1.54
HMGB3-202ENST00000419110 SLC25A12O75746 678 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 CLIC3O95833 236 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 LYNP07948 512 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 CELA2AP08217 269 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 GNAO1P09471 354 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 SAGP10523 405 aaPredicted RBP5.45□□□□□ -1.54
HMGB3-202ENST00000419110 GP1BBP13224 206 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 IFI30P13284 250 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 OSMP13725 252 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 POU2F1P14859 743 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 ITPKBP27987 946 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 POU1F1P28069 291 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 GGT2P36268 569 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 SOX3P41225 446 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 MASP1P48740 699 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 P2RX1P51575 399 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 ZNF41P51814 821 aaPredicted RBP5.45□□□□□ -1.54
HMGB3-202ENST00000419110 RRADP55042 308 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 GABARAPL2P60520 117 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 RELBQ01201 579 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 TEKQ02763 1124 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 COX10Q12887 443 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 TSPAN31Q12999 210 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 AIMP2Q13155 320 aaKnown RBP5.45□□□□□ -1.54
HMGB3-202ENST00000419110 TOP3AQ13472 1001 aaPredicted RBP5.45□□□□□ -1.54
HMGB3-202ENST00000419110 RAPSNQ13702 412 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 BROXQ5VW32 411 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 ZNF770Q6IQ21 691 aaPredicted RBP5.45□□□□□ -1.54
HMGB3-202ENST00000419110 TMEM81Q6P7N7 255 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 KLHL17Q6TDP4 642 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 UGT2A3Q6UWM9 527 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 C5orf46Q6UWT4 87 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 ZNF620Q6ZNG0 422 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 RTL4Q6ZR62 310 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 TMPRSS7Q7RTY8 843 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 TSPYL5Q86VY4 417 aaPredicted RBP5.45□□□□□ -1.54
HMGB3-202ENST00000419110 RNF113BQ8IZP6 322 aaKnown RBP5.45□□□□□ -1.54
HMGB3-202ENST00000419110 CYP4Z2PQ8N1L4 340 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 SLC43A2Q8N370 569 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 CLDN22Q8N7P3 220 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 CLEC1AQ8NC01 280 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 OR10G3Q8NGC4 313 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 OR4K17Q8NGC6 315 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 OR4C3Q8NH37 302 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 OR5W2Q8NH69 310 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 TMEM255BQ8WV15 326 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 ST8SIA1Q92185 356 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 HGDQ93099 445 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 C3orf49Q96BT1 292 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 PLEKHA8Q96JA3 519 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 FER1L6-AS2Q96M78 137 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 SLC38A2Q96QD8 506 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 SECISBP2Q96T21 854 aaKnown RBP5.45□□□□□ -1.54
HMGB3-202ENST00000419110 WFDC6Q9BQY6 131 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 RSPO3Q9BXY4 272 aaPredicted RBP5.45□□□□□ -1.54
HMGB3-202ENST00000419110 MRPS26Q9BYN8 205 aaKnown RBP5.45□□□□□ -1.54
HMGB3-202ENST00000419110 SLC19A3Q9BZV2 496 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 SPRY4Q9C004 299 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 GRIP2Q9C0E4 1043 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 ZNF696Q9H7X3 374 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 SLC25A19Q9HC21 320 aa5.45□□□□□ -1.54
HMGB3-202ENST00000419110 ZBTB20Q9HC78 741 aaPredicted RBP5.45□□□□□ -1.54
HMGB3-202ENST00000419110 CCNB1IP1Q9NPC3 277 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms