RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 SPG11Q96JI7 2443 aa18.44■□□□□ 0.54
PKNOX1-202ENST00000418336 MPDZO75970 2070 aa18.43■□□□□ 0.54
PKNOX1-202ENST00000418336 AP3D1O14617 1153 aa18.43■□□□□ 0.54
PKNOX1-202ENST00000418336 CTAG2O75638 210 aa18.43■□□□□ 0.54
PKNOX1-202ENST00000418336 NUDT14O95848 222 aa18.43■□□□□ 0.54
PKNOX1-202ENST00000418336 FCGR2AP12318 317 aa18.43■□□□□ 0.54
PKNOX1-202ENST00000418336 KLK2P20151 261 aa18.43■□□□□ 0.54
PKNOX1-202ENST00000418336 SFTPDP35247 375 aa18.43■□□□□ 0.54
PKNOX1-202ENST00000418336 PEX19P40855 299 aa18.43■□□□□ 0.54
PKNOX1-202ENST00000418336 DSTNP60981 165 aa18.43■□□□□ 0.54
PKNOX1-202ENST00000418336 STX1BP61266 288 aa18.43■□□□□ 0.54
PKNOX1-202ENST00000418336 IRX1P78414 480 aaPredicted RBP18.43■□□□□ 0.54
PKNOX1-202ENST00000418336 SQLEQ14534 574 aa18.43■□□□□ 0.54
PKNOX1-202ENST00000418336 DAZAP2Q15038 168 aaPredicted RBP18.43■□□□□ 0.54
PKNOX1-202ENST00000418336 DLEU7Q6UYE1 221 aa18.43■□□□□ 0.54
PKNOX1-202ENST00000418336 FAM214BQ7L5A3 538 aa18.43■□□□□ 0.54
PKNOX1-202ENST00000418336 CMIPQ8IY22 773 aa18.43■□□□□ 0.54
PKNOX1-202ENST00000418336 TMCO5AQ8N6Q1 288 aa18.43■□□□□ 0.54
PKNOX1-202ENST00000418336 LINC01560Q8TB33 94 aa18.43■□□□□ 0.54
PKNOX1-202ENST00000418336 ZNF559Q9BR84 538 aa18.43■□□□□ 0.54
PKNOX1-202ENST00000418336 SLC24A3Q9HC58 644 aa18.43■□□□□ 0.54
PKNOX1-202ENST00000418336 NPHS2Q9NP85 383 aa18.43■□□□□ 0.54
PKNOX1-202ENST00000418336 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.43■□□□□ 0.54
PKNOX1-202ENST00000418336 VAPAQ9P0L0 249 aa18.43■□□□□ 0.54
PKNOX1-202ENST00000418336 P2RX2Q9UBL9 471 aa18.43■□□□□ 0.54
PKNOX1-202ENST00000418336 NR2F1P10589 423 aa18.42■□□□□ 0.54
PKNOX1-202ENST00000418336 CRATP43155 626 aa18.42■□□□□ 0.54
PKNOX1-202ENST00000418336 CCR4P51679 360 aa18.42■□□□□ 0.54
PKNOX1-202ENST00000418336 CARD18P57730 90 aa18.42■□□□□ 0.54
PKNOX1-202ENST00000418336 SIRPAP78324 504 aa18.42■□□□□ 0.54
PKNOX1-202ENST00000418336 SGCBQ16585 318 aa18.42■□□□□ 0.54
PKNOX1-202ENST00000418336 TMEM176BQ3YBM2 270 aaPredicted RBP18.42■□□□□ 0.54
PKNOX1-202ENST00000418336 RPS26P11Q5JNZ5 115 aaPredicted RBP18.42■□□□□ 0.54
PKNOX1-202ENST00000418336 C6orf10Q5SRN2 563 aa18.42■□□□□ 0.54
PKNOX1-202ENST00000418336 CNEP1R1Q8N9A8 125 aa18.42■□□□□ 0.54
PKNOX1-202ENST00000418336 FAM222BQ8WU58 562 aa18.42■□□□□ 0.54
PKNOX1-202ENST00000418336 ROBO4Q8WZ75 1007 aa18.42■□□□□ 0.54
PKNOX1-202ENST00000418336 TMEM19Q96HH6 336 aa18.42■□□□□ 0.54
PKNOX1-202ENST00000418336 GMPPAQ96IJ6 420 aaPredicted RBP18.42■□□□□ 0.54
PKNOX1-202ENST00000418336 STOML1Q9UBI4 398 aa18.42■□□□□ 0.54
PKNOX1-202ENST00000418336 CLEC4AQ9UMR7 237 aa18.42■□□□□ 0.54
PKNOX1-202ENST00000418336 CLIC1O00299 241 aa18.41■□□□□ 0.54
PKNOX1-202ENST00000418336 NR5A2O00482 541 aa18.41■□□□□ 0.54
PKNOX1-202ENST00000418336 FAAHO00519 579 aa18.41■□□□□ 0.54
PKNOX1-202ENST00000418336 CYP7B1O75881 506 aa18.41■□□□□ 0.54
PKNOX1-202ENST00000418336 ANP32DO95626 131 aa18.41■□□□□ 0.54
PKNOX1-202ENST00000418336 BCHEP06276 602 aa18.41■□□□□ 0.54
PKNOX1-202ENST00000418336 PGCP20142 388 aa18.41■□□□□ 0.54
PKNOX1-202ENST00000418336 ME2P23368 584 aa18.41■□□□□ 0.54
PKNOX1-202ENST00000418336 ANXA11P50995 505 aaKnown RBP18.41■□□□□ 0.54
PKNOX1-202ENST00000418336 FAM27E3Q08E93 113 aa18.41■□□□□ 0.54
PKNOX1-202ENST00000418336 MYBPHQ13203 477 aa18.41■□□□□ 0.54
PKNOX1-202ENST00000418336 AGKQ53H12 422 aa18.41■□□□□ 0.54
PKNOX1-202ENST00000418336 MRPL2Q5T653 305 aaKnown RBP18.41■□□□□ 0.54
PKNOX1-202ENST00000418336 ZNF836Q6ZNA1 936 aa18.41■□□□□ 0.54
PKNOX1-202ENST00000418336 C22orf34Q6ZV56 151 aa18.41■□□□□ 0.54
PKNOX1-202ENST00000418336 RETREG3Q86VR2 466 aa18.41■□□□□ 0.54
PKNOX1-202ENST00000418336 VRK2Q86Y07 508 aa18.41■□□□□ 0.54
PKNOX1-202ENST00000418336 ZNF610Q8N9Z0 462 aa18.41■□□□□ 0.54
PKNOX1-202ENST00000418336 WDR60Q8WVS4 1066 aa18.41■□□□□ 0.54
PKNOX1-202ENST00000418336 MAL2Q969L2 176 aa18.41■□□□□ 0.54
PKNOX1-202ENST00000418336 A4GALTQ9NPC4 353 aa18.41■□□□□ 0.54
PKNOX1-202ENST00000418336 PLSCR4Q9NRQ2 329 aa18.41■□□□□ 0.54
PKNOX1-202ENST00000418336 DCTN4Q9UJW0 460 aa18.41■□□□□ 0.54
PKNOX1-202ENST00000418336 CCDC168Q8NDH2 2452 aa18.4■□□□□ 0.54
PKNOX1-202ENST00000418336 A0A1W2PNR3 127 aa18.4■□□□□ 0.54
PKNOX1-202ENST00000418336 A0A1W2PP18 115 aa18.4■□□□□ 0.54
PKNOX1-202ENST00000418336 CDHR4A6H8M9 788 aa18.4■□□□□ 0.54
PKNOX1-202ENST00000418336 A6NNC1 897 aa18.4■□□□□ 0.54
PKNOX1-202ENST00000418336 DBIP07108 87 aaKnown RBP18.4■□□□□ 0.54
PKNOX1-202ENST00000418336 ACAA2P42765 397 aaKnown RBP18.4■□□□□ 0.54
PKNOX1-202ENST00000418336 HPCAP84074 193 aa18.4■□□□□ 0.54
PKNOX1-202ENST00000418336 EPS8Q12929 822 aa18.4■□□□□ 0.54
PKNOX1-202ENST00000418336 C3orf33Q6P1S2 294 aa18.4■□□□□ 0.54
PKNOX1-202ENST00000418336 ADGRG3Q86Y34 549 aa18.4■□□□□ 0.54
PKNOX1-202ENST00000418336 KIF18BQ86Y91 864 aa18.4■□□□□ 0.54
PKNOX1-202ENST00000418336 OR6K3Q8NGY3 331 aa18.4■□□□□ 0.54
PKNOX1-202ENST00000418336 ABHD3Q8WU67 409 aa18.4■□□□□ 0.54
PKNOX1-202ENST00000418336 CPNE4Q96A23 557 aaPredicted RBP18.4■□□□□ 0.54
PKNOX1-202ENST00000418336 SIKE1Q9BRV8 207 aa18.4■□□□□ 0.54
PKNOX1-202ENST00000418336 BCL2L10Q9HD36 194 aa18.4■□□□□ 0.54
PKNOX1-202ENST00000418336 CTPS2Q9NRF8 586 aa18.4■□□□□ 0.54
PKNOX1-202ENST00000418336 RASSF1Q9NS23 344 aa18.4■□□□□ 0.54
PKNOX1-202ENST00000418336 RLIMQ9NVW2 624 aa18.4■□□□□ 0.54
PKNOX1-202ENST00000418336 MCTS1Q9ULC4 181 aaKnown RBP18.4■□□□□ 0.54
PKNOX1-202ENST00000418336 ZNF469Q96JG9 3925 aaPredicted RBP18.4■□□□□ 0.54
PKNOX1-202ENST00000418336 TUBAL3A6NHL2 446 aa18.39■□□□□ 0.53
PKNOX1-202ENST00000418336 SMAD9O15198 467 aaKnown RBP18.39■□□□□ 0.53
PKNOX1-202ENST00000418336 EPXP11678 715 aa18.39■□□□□ 0.53
PKNOX1-202ENST00000418336 ENPP1P22413 925 aa18.39■□□□□ 0.53
PKNOX1-202ENST00000418336 AGTR1P30556 359 aa18.39■□□□□ 0.53
PKNOX1-202ENST00000418336 RAC3P60763 192 aa18.39■□□□□ 0.53
PKNOX1-202ENST00000418336 MERTKQ12866 999 aa18.39■□□□□ 0.53
PKNOX1-202ENST00000418336 FADDQ13158 208 aa18.39■□□□□ 0.53
PKNOX1-202ENST00000418336 ADRM1Q16186 407 aa18.39■□□□□ 0.53
PKNOX1-202ENST00000418336 RNF220Q5VTB9 566 aa18.39■□□□□ 0.53
PKNOX1-202ENST00000418336 CLIP4Q8N3C7 705 aa18.39■□□□□ 0.53
PKNOX1-202ENST00000418336 ARFGAP2Q8N6H7 521 aa18.39■□□□□ 0.53
PKNOX1-202ENST00000418336 ATP6V1C2Q8NEY4 427 aa18.39■□□□□ 0.53
PKNOX1-202ENST00000418336 OR52P1PQ8NH57 321 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms