RNA–Protein interactions for RNA: ENST00000417652.5

NCL-203, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-203ENST00000417652 CTBP2P56545 445 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 CLDN18P56856 261 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 SESN3P58005 492 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 B3GALT5-AS1P59052 145 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 NCALDP61601 193 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 MXRA7P84157 204 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 RBBP4Q09028 425 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 SKP2Q13309 424 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 TOMM34Q15785 309 aaPredicted RBP6.21□□□□□ -1.42
NCL-203ENST00000417652 COQ5Q5HYK3 327 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 MRPL2Q5T653 305 aaKnown RBP6.21□□□□□ -1.42
NCL-203ENST00000417652 INTS11Q5TA45 600 aaKnown RBP6.21□□□□□ -1.42
NCL-203ENST00000417652 GKAP1Q5VSY0 366 aaPredicted RBP6.21□□□□□ -1.42
NCL-203ENST00000417652 PRAMEF8Q5VWM4 474 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 PRAMEF7Q5VXH5 474 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 SP5Q6BEB4 398 aaPredicted RBP6.21□□□□□ -1.42
NCL-203ENST00000417652 RTL6Q6ICC9 239 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 OR2A2Q6IF42 318 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 NANOGP8Q6NSW7 305 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 CLEC18BQ6UXF7 455 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 ESPNLQ6ZVH7 1005 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 RETREG3Q86VR2 466 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 ARMC8Q8IUR7 673 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 SLC30A8Q8IWU4 369 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 MSRB3Q8IXL7 192 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 CADM2Q8N3J6 435 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 MARVELD2Q8N4S9 558 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 ANKS4BQ8N8V4 417 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 CNEP1R1Q8N9A8 125 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 CLEC18CQ8NCF0 446 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 TNIP2Q8NFZ5 429 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 LILRB4Q8NHJ6 448 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 ST8SIA1Q92185 356 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 INTS12Q96CB8 462 aaKnown RBP6.21□□□□□ -1.42
NCL-203ENST00000417652 RCN3Q96D15 328 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 ARSGQ96EG1 525 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 PSMG3-AS1Q96PY0 264 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 LRRC37BQ96QE4 947 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 OR5B2Q96R09 309 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 CPPED1Q9BRF8 314 aaPredicted RBP6.21□□□□□ -1.42
NCL-203ENST00000417652 SPATA9Q9BWV2 254 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 TRIM8Q9BZR9 551 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 NANOGQ9H9S0 305 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 EXOSC3Q9NQT5 275 aaKnown RBP6.21□□□□□ -1.42
NCL-203ENST00000417652 ACER3Q9NUN7 267 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 RLIMQ9NVW2 624 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 Q9UFV3 132 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 ZNF443Q9Y2A4 671 aaPredicted RBP6.21□□□□□ -1.42
NCL-203ENST00000417652 AP3M1Q9Y2T2 418 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 FAM215AQ9Y5M1 114 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 HECTD1Q9ULT8 2610 aa6.21□□□□□ -1.42
NCL-203ENST00000417652 INTS1Q8N201 2190 aaKnown RBP6.2□□□□□ -1.42
NCL-203ENST00000417652 C7orf72A4D263 438 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 NKX2-6A6NCS4 301 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 B4DXG7 233 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 EEF1E1-BLOC1S5C9J1V9 151 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 H0YC42 278 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 M0QX08 132 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 SULT2B1O00204 365 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 NDUFAB1O14561 156 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 EEF1E1O43324 174 aaKnown RBP6.2□□□□□ -1.42
NCL-203ENST00000417652 CXCL13O43927 109 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 SMNDC1O75940 238 aaKnown RBP eCLIP6.2□□□□□ -1.422e-30■■■■□ 20.3
NCL-203ENST00000417652 IFNA14P01570 189 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 GKN3PP0CG01 181 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 RNF224P0DH78 156 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 FCGR2AP12318 317 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 BMP2P12643 396 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 COX6B1P14854 86 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 ETS2P15036 469 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 FKBP2P26885 142 aaKnown RBP6.2□□□□□ -1.42
NCL-203ENST00000417652 ELK4P28324 431 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 UQCRC1P31930 480 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 CPA2P48052 419 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 NUDT2P50583 147 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 POLR2HP52434 150 aaKnown RBP6.2□□□□□ -1.42
NCL-203ENST00000417652 SUCLG1P53597 346 aaKnown RBP6.2□□□□□ -1.42
NCL-203ENST00000417652 TPD52P55327 224 aaPredicted RBP6.2□□□□□ -1.42
NCL-203ENST00000417652 CLDN20P56880 219 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 EEF1A1P68104 462 aaKnown RBP6.2□□□□□ -1.42
NCL-203ENST00000417652 SIRPAP78324 504 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 SELENBP1Q13228 472 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 PON3Q15166 354 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 SLC25A35Q3KQZ1 300 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 RABL3Q5HYI8 236 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 EEF1A1P5Q5VTE0 462 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 WBP2NLQ6ICG8 309 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 C3orf33Q6P1S2 294 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 ZNF836Q6ZNA1 936 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 PLEKHM3Q6ZWE6 761 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 GRINAQ7Z429 371 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 ARPINQ7Z6K5 226 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 PATL1Q86TB9 770 aaKnown RBP6.2□□□□□ -1.42
NCL-203ENST00000417652 GCNT2Q8N0V5 402 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 CLIP4Q8N3C7 705 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 C9orf106Q8NAJ2 232 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 BHLHE22Q8NFJ8 381 aaPredicted RBP6.2□□□□□ -1.42
NCL-203ENST00000417652 OR8J3Q8NGG0 315 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 OR10D3Q8NH80 312 aa6.2□□□□□ -1.42
NCL-203ENST00000417652 OR2V1Q8NHB1 315 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms