RNA–Protein interactions for RNA: ENST00000415461.2

CTTN-205, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 1,021 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-205ENST00000415461 PLSCR4Q9NRQ2 329 aa17.98■□□□□ 0.47
CTTN-205ENST00000415461 CLDN24A6NM45 220 aa17.97■□□□□ 0.47
CTTN-205ENST00000415461 DEFB108AA8MXU0 73 aa17.97■□□□□ 0.47
CTTN-205ENST00000415461 DIAPH2O60879 1101 aa17.97■□□□□ 0.47
CTTN-205ENST00000415461 SLC22A3O75751 556 aa17.97■□□□□ 0.47
CTTN-205ENST00000415461 CHRM4P08173 479 aa17.97■□□□□ 0.47
CTTN-205ENST00000415461 SYPL1Q16563 259 aa17.97■□□□□ 0.47
CTTN-205ENST00000415461 COX20Q5RI15 118 aa17.97■□□□□ 0.47
CTTN-205ENST00000415461 ANKRD34AQ69YU3 496 aa17.97■□□□□ 0.47
CTTN-205ENST00000415461 C3orf33Q6P1S2 294 aa17.97■□□□□ 0.47
CTTN-205ENST00000415461 C22orf34Q6ZV56 151 aa17.97■□□□□ 0.47
CTTN-205ENST00000415461 ANKFN1Q8N957 763 aa17.97■□□□□ 0.47
CTTN-205ENST00000415461 OR9I1Q8NGQ6 314 aa17.97■□□□□ 0.47
CTTN-205ENST00000415461 OIT3Q8WWZ8 545 aa17.97■□□□□ 0.47
CTTN-205ENST00000415461 ST8SIA1Q92185 356 aa17.97■□□□□ 0.47
CTTN-205ENST00000415461 REXO5Q96IC2 774 aaKnown RBP17.97■□□□□ 0.47
CTTN-205ENST00000415461 CXXC4Q9H2H0 198 aa17.97■□□□□ 0.47
CTTN-205ENST00000415461 SDR39U1Q9NRG7 319 aaPredicted RBP17.97■□□□□ 0.47
CTTN-205ENST00000415461 SLC6A13Q9NSD5 602 aa17.97■□□□□ 0.47
CTTN-205ENST00000415461 ZNF226Q9NYT6 803 aa17.97■□□□□ 0.47
CTTN-205ENST00000415461 SLC35A3Q9Y2D2 325 aa17.97■□□□□ 0.47
CTTN-205ENST00000415461 IGHV3-15A0A0B4J1V0 119 aa17.96■□□□□ 0.47
CTTN-205ENST00000415461 ATE1O95260 518 aa17.96■□□□□ 0.47
CTTN-205ENST00000415461 RAF1P04049 648 aa17.96■□□□□ 0.47
CTTN-205ENST00000415461 PABPC4LP0CB38 370 aaKnown RBP17.96■□□□□ 0.47
CTTN-205ENST00000415461 CRYGSP22914 178 aa17.96■□□□□ 0.47
CTTN-205ENST00000415461 SESN3P58005 492 aa17.96■□□□□ 0.47
CTTN-205ENST00000415461 LRRC74AQ0VAA2 488 aa17.96■□□□□ 0.47
CTTN-205ENST00000415461 MERTKQ12866 999 aa17.96■□□□□ 0.47
CTTN-205ENST00000415461 GSTA3Q16772 222 aa17.96■□□□□ 0.47
CTTN-205ENST00000415461 FCRLAQ7L513 359 aa17.96■□□□□ 0.47
CTTN-205ENST00000415461 SLC38A1Q9H2H9 487 aa17.96■□□□□ 0.47
CTTN-205ENST00000415461 ACER3Q9NUN7 267 aa17.96■□□□□ 0.47
CTTN-205ENST00000415461 ZIM2Q9NZV7 527 aa17.96■□□□□ 0.47
CTTN-205ENST00000415461 EDARQ9UNE0 448 aa17.96■□□□□ 0.47
CTTN-205ENST00000415461 ITPR3Q14573 2671 aa17.96■□□□□ 0.47
CTTN-205ENST00000415461 RFXANKO14593 260 aa17.95■□□□□ 0.46
CTTN-205ENST00000415461 UBDO15205 165 aa17.95■□□□□ 0.46
CTTN-205ENST00000415461 IL6P05231 212 aa17.95■□□□□ 0.46
CTTN-205ENST00000415461 PGCP20142 388 aa17.95■□□□□ 0.46
CTTN-205ENST00000415461 ENPP1P22413 925 aa17.95■□□□□ 0.46
CTTN-205ENST00000415461 RYKP34925 604 aa17.95■□□□□ 0.46
CTTN-205ENST00000415461 KCNJ10P78508 379 aa17.95■□□□□ 0.46
CTTN-205ENST00000415461 KEAP1Q14145 624 aa17.95■□□□□ 0.46
CTTN-205ENST00000415461 RNPS1Q15287 305 aaKnown RBP17.95■□□□□ 0.46
CTTN-205ENST00000415461 TTMPQ5BVD1 217 aa17.95■□□□□ 0.46
CTTN-205ENST00000415461 AP1ARQ63HQ0 302 aa17.95■□□□□ 0.46
CTTN-205ENST00000415461 GTF2IRD2BQ6EKJ0 949 aa17.95■□□□□ 0.46
CTTN-205ENST00000415461 STAC2Q6ZMT1 411 aa17.95■□□□□ 0.46
CTTN-205ENST00000415461 PLEKHM3Q6ZWE6 761 aa17.95■□□□□ 0.46
CTTN-205ENST00000415461 GTF2IRD2Q86UP8 949 aa17.95■□□□□ 0.46
CTTN-205ENST00000415461 LSRQ86X29 649 aaPredicted RBP17.95■□□□□ 0.46
CTTN-205ENST00000415461 PIK3IP1Q96FE7 263 aa17.95■□□□□ 0.46
CTTN-205ENST00000415461 TRNT1Q96Q11 434 aaKnown RBP17.95■□□□□ 0.46
CTTN-205ENST00000415461 OR5B2Q96R09 309 aa17.95■□□□□ 0.46
CTTN-205ENST00000415461 KLHL13Q9P2N7 655 aa17.95■□□□□ 0.46
CTTN-205ENST00000415461 USH1CQ9Y6N9 552 aa17.95■□□□□ 0.46
CTTN-205ENST00000415461 MAP1AP78559 2803 aaPredicted RBP17.95■□□□□ 0.46
CTTN-205ENST00000415461 ADAM11O75078 769 aa17.94■□□□□ 0.46
CTTN-205ENST00000415461 KLK2P20151 261 aa17.94■□□□□ 0.46
CTTN-205ENST00000415461 ANXA11P50995 505 aaKnown RBP17.94■□□□□ 0.46
CTTN-205ENST00000415461 TXNL4AP83876 142 aaKnown RBP17.94■□□□□ 0.46
CTTN-205ENST00000415461 GTDC1Q4AE62 458 aa17.94■□□□□ 0.46
CTTN-205ENST00000415461 TMEM201Q5SNT2 666 aa17.94■□□□□ 0.46
CTTN-205ENST00000415461 TFAP2EQ6VUC0 442 aa17.94■□□□□ 0.46
CTTN-205ENST00000415461 NUFIP2Q7Z417 695 aaKnown RBP17.94■□□□□ 0.46
CTTN-205ENST00000415461 STK32CQ86UX6 486 aa17.94■□□□□ 0.46
CTTN-205ENST00000415461 TUSC5Q8IXB3 177 aa17.94■□□□□ 0.46
CTTN-205ENST00000415461 TMEM234Q8WY98 164 aa17.94■□□□□ 0.46
CTTN-205ENST00000415461 CNOT9Q92600 299 aaKnown RBP17.94■□□□□ 0.46
CTTN-205ENST00000415461 ATP6V1G3Q96LB4 118 aa17.94■□□□□ 0.46
CTTN-205ENST00000415461 ALPK1Q96QP1 1244 aa17.94■□□□□ 0.46
CTTN-205ENST00000415461 SLCO1B3Q9NPD5 702 aa17.94■□□□□ 0.46
CTTN-205ENST00000415461 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.94■□□□□ 0.46
CTTN-205ENST00000415461 LIPT1Q9Y234 373 aa17.94■□□□□ 0.46
CTTN-205ENST00000415461 MTORP42345 2549 aa17.94■□□□□ 0.46
CTTN-205ENST00000415461 AGAP5A6NIR3 686 aa17.93■□□□□ 0.46
CTTN-205ENST00000415461 KRT75O95678 551 aa17.93■□□□□ 0.46
CTTN-205ENST00000415461 THBDP07204 575 aa17.93■□□□□ 0.46
CTTN-205ENST00000415461 MVDP53602 400 aa17.93■□□□□ 0.46
CTTN-205ENST00000415461 RAC3P60763 192 aa17.93■□□□□ 0.46
CTTN-205ENST00000415461 SYT14P1Q58G82 188 aa17.93■□□□□ 0.46
CTTN-205ENST00000415461 EPGNQ6UW88 154 aa17.93■□□□□ 0.46
CTTN-205ENST00000415461 LRRC74BQ6ZQY2 392 aa17.93■□□□□ 0.46
CTTN-205ENST00000415461 BEND4Q6ZU67 534 aa17.93■□□□□ 0.46
CTTN-205ENST00000415461 MIER2Q8N344 545 aa17.93■□□□□ 0.46
CTTN-205ENST00000415461 ARFGAP2Q8N6H7 521 aa17.93■□□□□ 0.46
CTTN-205ENST00000415461 ZNF563Q8TA94 476 aa17.93■□□□□ 0.46
CTTN-205ENST00000415461 VPS33AQ96AX1 596 aa17.93■□□□□ 0.46
CTTN-205ENST00000415461 MBD6Q96DN6 1003 aa17.93■□□□□ 0.46
CTTN-205ENST00000415461 C7orf26Q96N11 449 aa17.93■□□□□ 0.46
CTTN-205ENST00000415461 HS3ST6Q96QI5 342 aa17.93■□□□□ 0.46
CTTN-205ENST00000415461 CCDC106Q9BWC9 280 aa17.93■□□□□ 0.46
CTTN-205ENST00000415461 EXOSC3Q9NQT5 275 aaKnown RBP17.93■□□□□ 0.46
CTTN-205ENST00000415461 CTPS2Q9NRF8 586 aa17.93■□□□□ 0.46
CTTN-205ENST00000415461 SERINC1Q9NRX5 453 aa17.93■□□□□ 0.46
CTTN-205ENST00000415461 PRRC2AP48634 2157 aaKnown RBP17.93■□□□□ 0.46
CTTN-205ENST00000415461 AP3D1O14617 1153 aa17.92■□□□□ 0.46
CTTN-205ENST00000415461 SMAD9O15198 467 aaKnown RBP17.92■□□□□ 0.46
CTTN-205ENST00000415461 PRKD3O94806 890 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms