RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 ZNF595Q8IYB9 648 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 ZDHHC23Q8IYP9 409 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 PRSS35Q8N3Z0 413 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 C8orf31Q8N9H6 132 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 WDSUB1Q8N9V3 476 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 SLC44A5Q8NCS7 719 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 TMEM161BQ8NDZ6 487 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 FAM46DQ8NEK8 389 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 OR11H1Q8NG94 326 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 OR8J3Q8NGG0 315 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 OR11H2Q8NH07 326 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 SLC35B2Q8TB61 432 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 LGALS14Q8TCE9 139 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 PROKR1Q8TCW9 393 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 BLOC1S5Q8TDH9 187 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 PHF10Q8WUB8 498 aaKnown RBP3.33□□□□□ -1.88
SF3B1-203ENST00000414174 SNX33Q8WV41 574 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 STMN2Q93045 179 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 MCHR2Q969V1 340 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 OTULINQ96BN8 352 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 C12orf43Q96C57 262 aaKnown RBP3.33□□□□□ -1.88
SF3B1-203ENST00000414174 SH3YL1Q96HL8 342 aaPredicted RBP3.33□□□□□ -1.88
SF3B1-203ENST00000414174 RNF170Q96K19 258 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 POM121L2Q96KW2 1035 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 MUS81Q96NY9 551 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 ERGIC2Q96RQ1 377 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 HBEGFQ99075 208 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 TSNAXQ99598 290 aaKnown RBP3.33□□□□□ -1.88
SF3B1-203ENST00000414174 CCDC3Q9BQI4 270 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 EBF4Q9BQW3 602 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 ATG101Q9BSB4 218 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 FEM1AQ9BSK4 669 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 MED18Q9BUE0 208 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 TRAF4Q9BUZ4 470 aaPredicted RBP3.33□□□□□ -1.88
SF3B1-203ENST00000414174 ALG8Q9BVK2 526 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 AMNQ9BXJ7 453 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 ERVK-6Q9BXR3 956 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 CTDSP1Q9GZU7 261 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 OR10A5Q9H207 317 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 SLC25A32Q9H2D1 315 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 BOLA2Q9H3K6 86 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 FN3KQ9H479 309 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 ESRP2Q9H6T0 727 aaKnown RBP3.33□□□□□ -1.88
SF3B1-203ENST00000414174 MANSC1Q9H8J5 431 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 TPT1P8Q9HAU6 139 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 RHOFQ9HBH0 211 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 POPDC2Q9HBU9 364 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 XPNPEP3Q9NQH7 507 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 ASAH2Q9NR71 780 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 C20orf141Q9NUB4 165 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 SIDT1Q9NXL6 827 aaKnown RBP3.33□□□□□ -1.88
SF3B1-203ENST00000414174 ING3Q9NXR8 418 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 TFCP2L1Q9NZI6 479 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 GNPTGQ9UJJ9 305 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 CLIC4Q9Y696 253 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 USP42Q9H9J4 1324 aaKnown RBP3.33□□□□□ -1.88
SF3B1-203ENST00000414174 BCL9O00512 1426 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 PDS5BQ9NTI5 1447 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 CUX2O14529 1486 aa3.33□□□□□ -1.88
SF3B1-203ENST00000414174 NPIPA5A0A0B4J1W7 369 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 GXYLT2A0PJZ3 443 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 FRG2CA6NGY1 282 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 MBD3L5A6NJ08 208 aaPredicted RBP3.32□□□□□ -1.88
SF3B1-203ENST00000414174 KLRF2D3W0D1 207 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 PROB1E7EW31 1015 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 ANHXE9PGG2 379 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 NPIPA5E9PKD4 350 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 NPIPA3F8WFD2 350 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 G3V2T6 193 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 TSTD3H0UI37 97 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 TMX2-CTNND1H3BSU7 103 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 DFFAO00273 331 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 SDHDO14521 159 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 PTGESO14684 152 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 LDB2O43679 373 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 SLC25A12O75746 678 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 PAPSS2O95340 614 aaPredicted RBP3.32□□□□□ -1.88
SF3B1-203ENST00000414174 TSPAN13O95857 204 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 OAS1P00973 400 aaKnown RBP3.32□□□□□ -1.88
SF3B1-203ENST00000414174 JUNP05412 331 aaKnown RBP3.32□□□□□ -1.88
SF3B1-203ENST00000414174 RAB40ALP0C0E4 278 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 C1GALT1C1LP0DN25 315 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 SPP1P10451 314 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 FCGR1AP12314 374 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 ETS2P15036 469 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 PAX1P15863 534 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 ANOS1P23352 680 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 SSTR1P30872 391 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 GNRHRP30968 328 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 NUMBP49757 651 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 AKR1D1P51857 326 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 HMGCS2P54868 508 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 UCP3P55916 312 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 KCNK10P57789 538 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 FAM3BP58499 235 aaPredicted RBP3.32□□□□□ -1.88
SF3B1-203ENST00000414174 SNAP25P60880 206 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 RAP2BP61225 183 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 RANP62826 216 aaKnown RBP3.32□□□□□ -1.88
SF3B1-203ENST00000414174 HSD11B2P80365 405 aa3.32□□□□□ -1.88
SF3B1-203ENST00000414174 IL5RAQ01344 420 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms