RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 ZNF703Q9H7S9 590 aaPredicted RBP15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 NTN4Q9HB63 628 aa15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 ZNF232Q9UNY5 417 aa15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 GPR55Q9Y2T6 319 aaPredicted RBP15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 C15orf41Q9Y2V0 281 aa15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 NPFFR2Q9Y5X5 522 aa15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 LIPGQ9Y5X9 500 aa15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 GTF3C1Q12789 2109 aa15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 KIAA0513O60268 411 aa15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 ZNF23P17027 643 aa15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 ARHGDIAP52565 204 aa15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 NUP107P57740 925 aa15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 LARS2Q15031 903 aaKnown RBP15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 ZSWIM7Q19AV6 140 aa15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 CYP27C1Q4G0S4 372 aa15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 IQCCQ4KMZ1 466 aa15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 EIPR1Q53HC9 387 aa15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 ZNF311Q5JNZ3 666 aa15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 MEX3BQ6ZN04 569 aaKnown RBP15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 ZDHHC13Q8IUH4 622 aa15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 ZNF441Q8N8Z8 693 aa15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 PIK3R3Q92569 461 aa15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 TMBIM1Q969X1 311 aa15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 NRBF2Q96F24 287 aa15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 ZNF300Q96RE9 604 aaPredicted RBP15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 SLC24A3Q9HC58 644 aa15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 KLHL28Q9NXS3 571 aa15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 MRTO4Q9UKD2 239 aaKnown RBP15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 SLC13A4Q9UKG4 626 aa15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 OAZ3Q9UMX2 235 aa15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 ABCG2Q9UNQ0 655 aa15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 FAM32AQ9Y421 112 aaKnown RBP15.4■□□□□ 0.06
SCAMP4-204ENST00000414057 ITPR2Q14571 2701 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 FRG2CA6NGY1 282 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 AGAP5A6NIR3 686 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 hCG_2039718K7EN88 272 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 KCNK2O95069 426 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 LGI1O95970 557 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 DBIP07108 87 aaKnown RBP15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 CT45A8P0DMV1 189 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 CT45A9P0DMV2 189 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 ZNF26P17031 533 aaPredicted RBP15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 NAGAP17050 411 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 RHCEP18577 417 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 ATP6V1C1P21283 382 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 DRD5P21918 477 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 RPS4Y1P22090 263 aaKnown RBP15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 LCN1P31025 176 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 PSMD4P55036 377 aaKnown RBP15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 CT45A2Q5DJT8 189 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 CYP4Z1Q86W10 505 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 HIPK1Q86Z02 1210 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 GPR32P1Q8NGA4 272 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 OR52P1PQ8NH57 321 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 OR5K1Q8NHB7 308 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 LURAP1Q96LR2 239 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 TTYH2Q9BSA4 534 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 ARMC7Q9H6L4 198 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 COQ10BQ9H8M1 238 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 REEP1Q9H902 201 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 ALKBH4Q9NXW9 302 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 NDUFAF4Q9P032 175 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 CBLCQ9ULV8 474 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 SH3GLB1Q9Y371 365 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 OR10H1Q9Y4A9 318 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 ENPP4Q9Y6X5 453 aa15.39■□□□□ 0.05
SCAMP4-204ENST00000414057 CENPEQ02224 2701 aa15.38■□□□□ 0.05
SCAMP4-204ENST00000414057 SAC3D1A6NKF1 404 aa15.38■□□□□ 0.05
SCAMP4-204ENST00000414057 FAM90A27PA6NNH2 459 aa15.38■□□□□ 0.05
SCAMP4-204ENST00000414057 FCMRO60667 390 aa15.38■□□□□ 0.05
SCAMP4-204ENST00000414057 NME6O75414 186 aaPredicted RBP15.38■□□□□ 0.05
SCAMP4-204ENST00000414057 E2F6O75461 281 aa15.38■□□□□ 0.05
SCAMP4-204ENST00000414057 CELA3AP09093 270 aa15.38■□□□□ 0.05
SCAMP4-204ENST00000414057 DNAJA1P31689 397 aaKnown RBP15.38■□□□□ 0.05
SCAMP4-204ENST00000414057 MASP1P48740 699 aa15.38■□□□□ 0.05
SCAMP4-204ENST00000414057 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.38■□□□□ 0.05
SCAMP4-204ENST00000414057 LIN52Q52LA3 116 aa15.38■□□□□ 0.05
SCAMP4-204ENST00000414057 EPHX4Q8IUS5 362 aa15.38■□□□□ 0.05
SCAMP4-204ENST00000414057 ZNF295-AS1Q8N0V1 137 aa15.38■□□□□ 0.05
SCAMP4-204ENST00000414057 ACBD4Q8NC06 268 aa15.38■□□□□ 0.05
SCAMP4-204ENST00000414057 ADIPOR1Q96A54 375 aa15.38■□□□□ 0.05
SCAMP4-204ENST00000414057 RMND5BQ96G75 393 aaPredicted RBP15.38■□□□□ 0.05
SCAMP4-204ENST00000414057 LCORQ96JN0 433 aaPredicted RBP15.38■□□□□ 0.05
SCAMP4-204ENST00000414057 EPYCQ99645 322 aa15.38■□□□□ 0.05
SCAMP4-204ENST00000414057 ITPAQ9BY32 194 aa15.38■□□□□ 0.05
SCAMP4-204ENST00000414057 PROK2Q9HC23 129 aa15.38■□□□□ 0.05
SCAMP4-204ENST00000414057 MKLN1Q9UL63 735 aa15.38■□□□□ 0.05
SCAMP4-204ENST00000414057 DTX4Q9Y2E6 619 aa15.38■□□□□ 0.05
SCAMP4-204ENST00000414057 GXYLT2A0PJZ3 443 aa15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 G3V2T6 193 aa15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 ACOX3O15254 700 aa15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 TRIM3O75382 744 aaPredicted RBP15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 HPRP00739 348 aa15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 RFPL3SP0C7P2 107 aa15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 ACADSP16219 412 aa15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 IL7RP16871 459 aa15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 FPR1P21462 350 aa15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 GDF1P27539 372 aa15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 OR1E2P47887 323 aa15.37■□□□□ 0.05
SCAMP4-204ENST00000414057 FBXW4P57775 412 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms