RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 CORINQ9Y5Q5 1042 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 GMEB1Q9Y692 573 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 ALOX12BO75342 701 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 OR7A10O76100 309 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 TECPR1Q7Z6L1 1165 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 ABHD5Q8WTS1 349 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 CHTF18Q8WVB6 975 aa16.12■□□□□ 0.17
PHRF1-202ENST00000413872 UBE2J1Q9Y385 318 aaPredicted RBP16.12■□□□□ 0.17
PHRF1-202ENST00000413872 FAM171A2A8MVW0 826 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 KLRC4-KLRK1H3BQV0 150 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 ZNF806P0C7X5 589 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 MSX1P28360 303 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 PTGER1P34995 402 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 FCRLBQ6BAA4 426 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 FAM111BQ6SJ93 734 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 Q6ZSR9 355 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 FBXO27Q8NI29 283 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 ADAMTS19Q8TE59 1207 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 EMC9Q9Y3B6 208 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 LAMA4Q16363 1823 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 EIF1BO60739 113 aaKnown RBP16.11■□□□□ 0.17
PHRF1-202ENST00000413872 H2AFB2P0C5Z0 115 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 PRKAR1BP31321 381 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 BCL6P41182 706 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 HOXC5Q00444 222 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 ESX1Q8N693 406 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 POGLUT1Q8NBL1 392 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 B3GNT3Q9Y2A9 372 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 BPNT1O95861 308 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 CSF2P04141 144 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 LPLP06858 475 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 KIAA0907Q7Z7F0 614 aaPredicted RBP16.11■□□□□ 0.17
PHRF1-202ENST00000413872 SLC43A2Q8N370 569 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 CCDC71LQ8N9Z2 235 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 LSM14AQ8ND56 463 aaKnown RBP16.11■□□□□ 0.17
PHRF1-202ENST00000413872 ZNF740Q8NDX6 193 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 SLC38A5Q8WUX1 472 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 THSD1Q9NS62 852 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 PRSS3P35030 304 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 OR1D5P58170 312 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 TMEM176BQ3YBM2 270 aaPredicted RBP16.11■□□□□ 0.17
PHRF1-202ENST00000413872 ZNF322Q6U7Q0 402 aaPredicted RBP16.11■□□□□ 0.17
PHRF1-202ENST00000413872 TRAPPC6BQ86SZ2 158 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 TMEM151AQ8N4L1 468 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 ZFP90Q8TF47 636 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 GCDHQ92947 438 aaPredicted RBP16.11■□□□□ 0.17
PHRF1-202ENST00000413872 PIGQQ9BRB3 760 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 PCED1AQ9H1Q7 454 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 A4GALTQ9NPC4 353 aa16.11■□□□□ 0.17
PHRF1-202ENST00000413872 INTS6Q9UL03 887 aaKnown RBP16.11■□□□□ 0.17
PHRF1-202ENST00000413872 SUSD5O60279 629 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 DCNP07585 359 aaKnown RBP16.1■□□□□ 0.17
PHRF1-202ENST00000413872 RPS5P46782 204 aaKnown RBP16.1■□□□□ 0.17
PHRF1-202ENST00000413872 MRPS10P82664 201 aaKnown RBP16.1■□□□□ 0.17
PHRF1-202ENST00000413872 SPAG16Q8N0X2 631 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 SLC7A13Q8TCU3 470 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 SFTPBP07988 381 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 SNU13P55769 128 aaKnown RBP16.1■□□□□ 0.17
PHRF1-202ENST00000413872 NKAIN2Q5VXU1 208 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 DPY19L2P1Q6NXN4 242 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 GDPD1Q8N9F7 314 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 DUSP19Q8WTR2 217 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 MRGPRX1Q96LB2 322 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 COQ10AQ96MF6 247 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 MOKQ9UQ07 419 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 ZNF749O43361 778 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 TRHRP34981 398 aaPredicted RBP16.1■□□□□ 0.17
PHRF1-202ENST00000413872 FGL1Q08830 312 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 C9orf50Q5SZB4 431 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 C18orf63Q68DL7 685 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 VASH1Q7L8A9 365 aaPredicted RBP16.1■□□□□ 0.17
PHRF1-202ENST00000413872 FAM160A2Q8N612 972 aaPredicted RBP16.1■□□□□ 0.17
PHRF1-202ENST00000413872 RRNAD1Q96FB5 475 aaKnown RBP16.1■□□□□ 0.17
PHRF1-202ENST00000413872 TMEM202A6NGA9 273 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 GPR171O14626 319 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 TAPBPO15533 448 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 ACTL6BO94805 426 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 UTS2O95399 124 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 SLC2A5P22732 501 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 FKBP2P26885 142 aaKnown RBP16.1■□□□□ 0.17
PHRF1-202ENST00000413872 ELAVL1Q15717 326 aaKnown RBP16.1■□□□□ 0.17
PHRF1-202ENST00000413872 UGT8Q16880 541 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 RTL6Q6ICC9 239 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 CGB2Q6NT52 195 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 RAB11FIP2Q7L804 512 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 CHPT1Q8WUD6 406 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 TM7SF3Q9NS93 570 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 DNAJB11Q9UBS4 358 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 KCNN3Q9UGI6 736 aa16.1■□□□□ 0.17
PHRF1-202ENST00000413872 STRCQ7RTU9 1775 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 SSC5DA1L4H1 1573 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 TRAV27A0A087WT01 109 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 PLRG1O43660 514 aaKnown RBP16.09■□□□□ 0.17
PHRF1-202ENST00000413872 CREBL2O60519 120 aaPredicted RBP16.09■□□□□ 0.17
PHRF1-202ENST00000413872 IFNA5P01569 189 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 PBX2P40425 430 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 OPRD1P41143 372 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 MAGEA12P43365 314 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 GIPRP48546 466 aa16.09■□□□□ 0.17
PHRF1-202ENST00000413872 NTRK2Q16620 822 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms