RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 PGCP20142 388 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 GSTM3P21266 225 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 FPR3P25089 353 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 ITGA3P26006 1051 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 EPHA2P29317 976 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 SLC1A3P43003 542 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 GPR4P46093 362 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 GSSP48637 474 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 IDH2P48735 452 aaKnown RBP6.06□□□□□ -1.44
VPS41-204ENST00000413141 ST13P50502 369 aaKnown RBP6.06□□□□□ -1.44
VPS41-204ENST00000413141 CTBP2P56545 445 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 ESRRGP62508 458 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 RPP38P78345 283 aaKnown RBP6.06□□□□□ -1.44
VPS41-204ENST00000413141 ALDH6A1Q02252 535 aaKnown RBP6.06□□□□□ -1.44
VPS41-204ENST00000413141 C17orf67Q0P5P2 114 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 AIMP2Q13155 320 aaKnown RBP6.06□□□□□ -1.44
VPS41-204ENST00000413141 SNTA1Q13424 505 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 IL18R1Q13478 541 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 TOMM34Q15785 309 aaPredicted RBP6.06□□□□□ -1.44
VPS41-204ENST00000413141 MEP1AQ16819 746 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 COL28A1Q2UY09 1125 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 ACER2Q5QJU3 275 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 ZNF468Q5VIY5 522 aaPredicted RBP6.06□□□□□ -1.44
VPS41-204ENST00000413141 PRAMEF20Q5VT98 475 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 ZNF691Q5VV52 312 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 KRT80Q6KB66 452 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 UGT2A3Q6UWM9 527 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 IL20RBQ6UXL0 311 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 CD300LDQ6UXZ3 194 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 LINC00114Q6XXX2 140 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 PRICKLE2Q7Z3G6 844 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 ATG4DQ86TL0 474 aaPredicted RBP6.06□□□□□ -1.44
VPS41-204ENST00000413141 MEX3DQ86XN8 651 aaKnown RBP6.06□□□□□ -1.44
VPS41-204ENST00000413141 GPALPP1Q8IXQ4 340 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 RNF113BQ8IZP6 322 aaKnown RBP6.06□□□□□ -1.44
VPS41-204ENST00000413141 BEST3Q8N1M1 668 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 TMEM156Q8N614 296 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 CLEC1AQ8NC01 280 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 OR5W2Q8NH69 310 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 ZNF563Q8TA94 476 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 RNF217Q8TC41 542 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 GNPDA2Q8TDQ7 276 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 PAQR8Q8TEZ7 354 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 DUSP19Q8WTR2 217 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 FER1L6-AS2Q96M78 137 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 HS6ST2Q96MM7 605 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 FRMD6Q96NE9 622 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 MUS81Q96NY9 551 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 NR1H4Q96RI1 486 aaPredicted RBP6.06□□□□□ -1.44
VPS41-204ENST00000413141 CCNL2Q96S94 520 aaPredicted RBP6.06□□□□□ -1.44
VPS41-204ENST00000413141 GPA33Q99795 319 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 UCK2Q9BZX2 261 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 LHPPQ9H008 270 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 C12orf10Q9HB07 376 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 CPNE5Q9HCH3 593 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 ATP13A2Q9NQ11 1180 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 C20orf141Q9NUB4 165 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 HPF1Q9NWY4 346 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 SELENONQ9NZV5 590 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 CNIH4Q9P003 139 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 PPP4R1LQ9P1A2 415 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 NDRG4Q9ULP0 352 aaKnown RBP6.06□□□□□ -1.44
VPS41-204ENST00000413141 TMEM5Q9Y2B1 443 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 PCDHGB5Q9Y5G0 923 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 CPAMD8Q8IZJ3 1885 aa6.06□□□□□ -1.44
VPS41-204ENST00000413141 NINQ8N4C6 2090 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 IGKV1D-42A0A075B6H8 117 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 ARGFXA6NJG6 315 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 ELOA3DA6NLF2 546 aaPredicted RBP6.05□□□□□ -1.44
VPS41-204ENST00000413141 ENO4A6NNW6 628 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 ZAR1LA6NP61 321 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 CDC42EP2O14613 210 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 GNB5O14775 395 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 NUDT14O95848 222 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 RPSAP08865 295 aaKnown RBP6.05□□□□□ -1.44
VPS41-204ENST00000413141 CCL3P10147 92 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 PRKAR1AP10644 381 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 PNMTP11086 282 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 IFI30P13284 250 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 SPINK2P20155 84 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 MAKP20794 623 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 CHMP24386 653 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 ITPKBP27987 946 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 MSX1P28360 303 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 TACR3P29371 465 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 GGT2P36268 569 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 HLCSP50747 726 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 RPS6KA3P51812 740 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 CRISP1P54107 249 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 RRADP55042 308 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 TPD52P55327 224 aaPredicted RBP6.05□□□□□ -1.44
VPS41-204ENST00000413141 DLX5P56178 289 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 NUP107P57740 925 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 MYBPC1Q00872 1141 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 PRKCDQ05655 676 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 CDC20Q12834 499 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 COX10Q12887 443 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 TSPAN31Q12999 210 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 RAPSNQ13702 412 aa6.05□□□□□ -1.44
VPS41-204ENST00000413141 QPRTQ15274 297 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms