RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 HIST2H2BCQ6DN03 193 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 QSOX2Q6ZRP7 698 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 R3HCC1LQ7Z5L2 792 aaKnown RBP4.87□□□□□ -1.63
LINC00342-201ENST00000412393 ISCA2Q86U28 154 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 AKAP14Q86UN6 197 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 LYSMD2Q8IV50 215 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 BEST3Q8N1M1 668 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 CA13Q8N1Q1 262 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 SLC5A8Q8N695 610 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 SPERTQ8NA61 448 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 IL17RDQ8NFM7 739 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 OR7A2PQ8NGA2 310 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 OR8J3Q8NGG0 315 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 OR6F1Q8NGZ6 308 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 GRPEL2Q8TAA5 225 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 STAG3L4Q8TBR4 150 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 KCTD4Q8WVF5 259 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 CYGBQ8WWM9 190 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 IPCEF1Q8WWN9 437 aaPredicted RBP4.87□□□□□ -1.63
LINC00342-201ENST00000412393 NR4A3Q92570 626 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 FCGR1BQ92637 280 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 GCDHQ92947 438 aaPredicted RBP4.87□□□□□ -1.63
LINC00342-201ENST00000412393 TRIM63Q969Q1 353 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 KIAA1191Q96A73 305 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 NXNL1Q96CM4 212 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 FBXL20Q96IG2 436 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 UTP23Q9BRU9 249 aaKnown RBP4.87□□□□□ -1.63
LINC00342-201ENST00000412393 ERVK-6Q9BXR3 956 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 PITHD1Q9GZP4 211 aaPredicted RBP4.87□□□□□ -1.63
LINC00342-201ENST00000412393 AICDAQ9GZX7 198 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 GABARAPL1Q9H0R8 117 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 SLA2Q9H6Q3 261 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 ALG9Q9H6U8 611 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 MMP25Q9NPA2 562 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 PRTFDC1Q9NRG1 225 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 ABI3Q9P2A4 366 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 XPR1Q9UBH6 696 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 ZMAT5Q9UDW3 170 aaKnown RBP4.87□□□□□ -1.63
LINC00342-201ENST00000412393 LEF1Q9UJU2 399 aaPredicted RBP4.87□□□□□ -1.63
LINC00342-201ENST00000412393 POU2F3Q9UKI9 436 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 BAG5Q9UL15 447 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 OSGIN2Q9Y236 505 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 TPRKBQ9Y3C4 175 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 MMACHCQ9Y4U1 282 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 ASB1Q9Y576 335 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 ANGPTL3Q9Y5C1 460 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 SNX5Q9Y5X3 404 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 NINQ8N4C6 2090 aa4.87□□□□□ -1.63
LINC00342-201ENST00000412393 NCOA6Q14686 2063 aaPredicted RBP4.86□□□□□ -1.63
LINC00342-201ENST00000412393 A0A075B6Q4 140 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 IGKV3D-11A0A0A0MRZ8 115 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 A0A1B0GUH1 482 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 LOC100130705A0A1B0GUX0 176 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 TCRBV16S1A1N1A0A5B0 115 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 FAM234BA2RU67 622 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 LRIT2A6NDA9 550 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 WIPF3A6NGB9 483 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 AGAP5A6NIR3 686 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 GABRR3A8MPY1 467 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 FAM25EA8MYX2 175 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 G3V2T6 193 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 M0R3G1 203 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 CLDN4O14493 209 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 UBFD1O14562 309 aaKnown RBP4.86□□□□□ -1.63
LINC00342-201ENST00000412393 LRRTM2O43300 516 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 KLF4O43474 513 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 ASNA1O43681 348 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 PRAMEF4O60810 478 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 KERAO60938 352 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 GMNNO75496 209 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 SCELO95171 688 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 CD22P20273 847 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 CAPN3P20807 821 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 MAOAP21397 527 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 ZNF10P21506 573 aaPredicted RBP4.86□□□□□ -1.63
LINC00342-201ENST00000412393 CERS1P27544 350 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 MAGEA2P43356 314 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 RPS5P46782 204 aaKnown RBP4.86□□□□□ -1.63
LINC00342-201ENST00000412393 TDGF1P3P51864 188 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 RAD23AP54725 363 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 PER3P56645 1201 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 RAB38P57729 211 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 GNG2P59768 71 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 CTAG1AP78358 180 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 PMP22Q01453 160 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 LIPEQ05469 1076 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 TGM3Q08188 693 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 CD300CQ08708 224 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 CD47Q08722 323 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 CHIT1Q13231 466 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 RUNX2Q13950 521 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 OR1C1Q15619 314 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 NEDD8Q15843 81 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 FAM98BQ52LJ0 330 aaKnown RBP4.86□□□□□ -1.63
LINC00342-201ENST00000412393 UNC50Q53HI1 259 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 SMUG1Q53HV7 270 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 XKR7Q5GH72 579 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 ZNF766Q5HY98 468 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 PAGE2BQ5JRK9 111 aa4.86□□□□□ -1.63
LINC00342-201ENST00000412393 PRAMEF9Q5VWM5 478 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms