RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 PIEZO2Q9H5I5 2752 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 DHRS12A0PJE2 317 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 FAM47E-STBD1D6RA91 191 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 SUSD5O60279 629 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 CDC40O60508 579 aaKnown RBP eCLIP13.78□□□□□ -0.2
LSM5-207ENST00000410044 HCN1O60741 890 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 TRAPPC6AO75865 159 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 RAP2AP10114 183 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 THRBP10828 461 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 GP1BBP13224 206 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 ZNF17P17021 662 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 ITGA2P17301 1181 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 RHCEP18577 417 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 CHMP24386 653 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 APOBEC1P41238 236 aaKnown RBP13.78□□□□□ -0.2
LSM5-207ENST00000410044 MAP2K6P52564 334 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 GFRA1P56159 465 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 VLDLRP98155 873 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 NHSL2Q5HYW2 709 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 FAM180AQ6UWF9 173 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 LINC00114Q6XXX2 140 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 PLEKHM3Q6ZWE6 761 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 TSPYL5Q86VY4 417 aaPredicted RBP13.78□□□□□ -0.2
LSM5-207ENST00000410044 CISD2Q8N5K1 135 aaKnown RBP13.78□□□□□ -0.2
LSM5-207ENST00000410044 ZNF563Q8TA94 476 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 SNRNP40Q96DI7 357 aaKnown RBP13.78□□□□□ -0.2
LSM5-207ENST00000410044 ZNF300Q96RE9 604 aaPredicted RBP13.78□□□□□ -0.2
LSM5-207ENST00000410044 SEPHS2Q99611 448 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 PRR14Q9BWN1 585 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 DENND2DQ9H6A0 471 aaPredicted RBP13.78□□□□□ -0.2
LSM5-207ENST00000410044 LUZP4Q9P127 313 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 DKKL1Q9UK85 242 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 A4GNTQ9UNA3 340 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 VDAC3Q9Y277 283 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 ITPR1Q14643 2758 aa13.78□□□□□ -0.2
LSM5-207ENST00000410044 A0A0B4J2E0 115 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 A0A1B0GWA3 101 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 A0A1B0GX12 115 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 TRAPPC13A5PLN9 417 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 TFECO14948 347 aaPredicted RBP13.77□□□□□ -0.21
LSM5-207ENST00000410044 EFNA2O43921 213 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 GMFGO60234 142 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 PRSS23O95084 383 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 OR5F1O95221 314 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 LYPD3O95274 346 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 FABP3P05413 133 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 CELA3AP09093 270 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 FKBP2P26885 142 aaKnown RBP13.77□□□□□ -0.21
LSM5-207ENST00000410044 SLC7A1P30825 629 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 KPNB1Q14974 876 aaKnown RBP13.77□□□□□ -0.21
LSM5-207ENST00000410044 WIPI1Q5MNZ9 446 aaPredicted RBP13.77□□□□□ -0.21
LSM5-207ENST00000410044 SWT1Q5T5J6 900 aaKnown RBP13.77□□□□□ -0.21
LSM5-207ENST00000410044 ULK3Q6PHR2 472 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 TRILQ7L0X0 811 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 YRDCQ86U90 279 aaKnown RBP13.77□□□□□ -0.21
LSM5-207ENST00000410044 ADGRG3Q86Y34 549 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 ZDHHC21Q8IVQ6 265 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 NEIL3Q8TAT5 605 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 ADAMTS16Q8TE57 1224 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 SLC38A4Q969I6 547 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 SLCO4A1Q96BD0 722 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 C3orf49Q96BT1 292 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 PRRC1Q96M27 445 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 ZNF347Q96SE7 839 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 NPAS1Q99742 590 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 PIGQQ9BRB3 760 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 DEFB127Q9H1M4 99 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 ARMC1Q9NVT9 282 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 OSGIN1Q9UJX0 560 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 V9GYQ6 96 aa13.77□□□□□ -0.21
LSM5-207ENST00000410044 TRGV5A0A0B4J1U4 118 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 OR2M5A3KFT3 312 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 ANKRD65E5RJM6 399 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 FFAR1O14842 300 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 WISP2O76076 250 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 WISP1O95388 367 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 ACTL6AO96019 429 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 THY1P04216 161 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 ELK4P28324 431 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 TACR3P29371 465 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 TDGF1P3P51864 188 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 POLR2HP52434 150 aaKnown RBP13.76□□□□□ -0.21
LSM5-207ENST00000410044 FOXK1P85037 733 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 FOXF1Q12946 379 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 PIN1Q13526 163 aaPredicted RBP13.76□□□□□ -0.21
LSM5-207ENST00000410044 TOMM20Q15388 145 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 DEF8Q6ZN54 512 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 ZNF771Q7L3S4 317 aaPredicted RBP13.76□□□□□ -0.21
LSM5-207ENST00000410044 ZNF605Q86T29 641 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 ATG4DQ86TL0 474 aaPredicted RBP13.76□□□□□ -0.21
LSM5-207ENST00000410044 PIK3C3Q8NEB9 887 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 OR14L1PQ8NHC6 308 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 DHRS1Q96LJ7 313 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 GPR137Q96N19 417 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 SLX1AQ9BQ83 275 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 CHID1Q9BWS9 393 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 AGPAT4Q9NRZ5 378 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 RPS6KB2Q9UBS0 482 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 RIMS3Q9UJD0 308 aa13.76□□□□□ -0.21
LSM5-207ENST00000410044 FAM32AQ9Y421 112 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms