RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 VRK2Q86Y07 508 aa12.6□□□□□ -0.39
GYPC-203ENST00000409836 ZZZ3Q8IYH5 903 aa12.6□□□□□ -0.39
GYPC-203ENST00000409836 TMCO5AQ8N6Q1 288 aa12.6□□□□□ -0.39
GYPC-203ENST00000409836 NAXEQ8NCW5 288 aa12.6□□□□□ -0.39
GYPC-203ENST00000409836 BHLHE22Q8NFJ8 381 aaPredicted RBP12.6□□□□□ -0.39
GYPC-203ENST00000409836 LILRB4Q8NHJ6 448 aa12.6□□□□□ -0.39
GYPC-203ENST00000409836 NFKBIDQ8NI38 313 aa12.6□□□□□ -0.39
GYPC-203ENST00000409836 SLC25A43Q8WUT9 341 aaPredicted RBP12.6□□□□□ -0.39
GYPC-203ENST00000409836 TM9SF2Q99805 663 aa12.6□□□□□ -0.39
GYPC-203ENST00000409836 SLC39A3Q9BRY0 314 aa12.6□□□□□ -0.39
GYPC-203ENST00000409836 THUMPD3Q9BV44 507 aaKnown RBP12.6□□□□□ -0.39
GYPC-203ENST00000409836 GID8Q9NWU2 228 aa12.6□□□□□ -0.39
GYPC-203ENST00000409836 Q9UFV3 132 aa12.6□□□□□ -0.39
GYPC-203ENST00000409836 ANGPT4Q9Y264 503 aa12.6□□□□□ -0.39
GYPC-203ENST00000409836 ARL2BPQ9Y2Y0 163 aa12.6□□□□□ -0.39
GYPC-203ENST00000409836 PKDREJQ9NTG1 2253 aa12.6□□□□□ -0.39
GYPC-203ENST00000409836 PRORSD1PA6NEY8 169 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 HSPB2A8KAH6 182 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 SHISA8B8ZZ34 492 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 H3BML4 177 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 EFNA2O43921 213 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 CLDN14O95500 239 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 CRHP06850 196 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 FCGR2AP12318 317 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 ME2P23368 584 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 FKBP2P26885 142 aaKnown RBP12.59□□□□□ -0.39
GYPC-203ENST00000409836 ACAA2P42765 397 aaKnown RBP12.59□□□□□ -0.39
GYPC-203ENST00000409836 RNF144AP50876 292 aaPredicted RBP12.59□□□□□ -0.39
GYPC-203ENST00000409836 SESN3P58005 492 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 PMPCAQ10713 525 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 SF3A3Q12874 501 aaKnown RBP eCLIP12.59□□□□□ -0.39
GYPC-203ENST00000409836 VEZF1Q14119 521 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 CAPRIN1Q14444 709 aaKnown RBP12.59□□□□□ -0.39
GYPC-203ENST00000409836 HSPB2Q16082 182 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 CYP51A1Q16850 503 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 SLC25A35Q3KQZ1 300 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 FBXL19-AS1Q494R0 122 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 PLEKHM3Q6ZWE6 761 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 CCDC80Q76M96 950 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 KRT73Q86Y46 540 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 FBXO27Q8NI29 283 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 RCN3Q96D15 328 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 REXO5Q96IC2 774 aaKnown RBP12.59□□□□□ -0.39
GYPC-203ENST00000409836 KLHL15Q96M94 604 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 SPATA5L1Q9BVQ7 753 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 FAM107BQ9H098 131 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 ARMC7Q9H6L4 198 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 COQ10BQ9H8M1 238 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 RNF122Q9H9V4 155 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 COQ3Q9NZJ6 369 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 ZNF629Q9UEG4 869 aaPredicted RBP12.59□□□□□ -0.39
GYPC-203ENST00000409836 PLEKHB1Q9UF11 243 aaPredicted RBP12.59□□□□□ -0.39
GYPC-203ENST00000409836 AP3M1Q9Y2T2 418 aa12.59□□□□□ -0.39
GYPC-203ENST00000409836 CFAP73A6NFT4 308 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 GJE1A6NN92 205 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 C5orf58C9J3I9 102 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 SYT5O00445 386 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 GMFGO60234 142 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 FZD7O75084 574 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 GCM2O75603 506 aaPredicted RBP12.58□□□□□ -0.4
GYPC-203ENST00000409836 RCBTB2O95199 551 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 NUDT14O95848 222 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 GP1BBP13224 206 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 UQCRBP14927 111 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 IGFBP2P18065 325 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 APOBEC1P41238 236 aaKnown RBP12.58□□□□□ -0.4
GYPC-203ENST00000409836 HTR3AP46098 478 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 PCYT1AP49585 367 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 CCR4P51679 360 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 ZNF136P52737 540 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 CRYBA2P53672 197 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 RPS3AP61247 264 aaKnown RBP12.58□□□□□ -0.4
GYPC-203ENST00000409836 VMACQ2NL98 169 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 MMEL1Q495T6 779 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 RABL3Q5HYI8 236 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 ERICH5Q6P6B1 374 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 C6orf89Q6UWU4 347 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 HMGN2P46Q86SG4 172 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 C9orf106Q8NAJ2 232 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 TNIP2Q8NFZ5 429 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 OR5M1Q8NGP8 315 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 OR2V1Q8NHB1 315 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 SDCCAG3Q96C92 435 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 CMTM5Q96DZ9 223 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 TRIM8Q9BZR9 551 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 ADAM19Q9H013 955 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 RLIMQ9NVW2 624 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 ABCD2Q9UBJ2 740 aa12.58□□□□□ -0.4
GYPC-203ENST00000409836 CENPEQ02224 2701 aa12.57□□□□□ -0.4
GYPC-203ENST00000409836 LOC100653049A0A140TA62 436 aa12.57□□□□□ -0.4
GYPC-203ENST00000409836 SLC22A20A6NK97 555 aa12.57□□□□□ -0.4
GYPC-203ENST00000409836 FAM220BPB1ANY3 271 aa12.57□□□□□ -0.4
GYPC-203ENST00000409836 H0YC42 278 aa12.57□□□□□ -0.4
GYPC-203ENST00000409836 AP3D1O14617 1153 aa12.57□□□□□ -0.4
GYPC-203ENST00000409836 DNPH1O43598 174 aa12.57□□□□□ -0.4
GYPC-203ENST00000409836 DCTN3O75935 186 aa12.57□□□□□ -0.4
GYPC-203ENST00000409836 KRT34O76011 436 aa12.57□□□□□ -0.4
GYPC-203ENST00000409836 MFN2O95140 757 aa12.57□□□□□ -0.4
GYPC-203ENST00000409836 C8BP07358 591 aa12.57□□□□□ -0.4
GYPC-203ENST00000409836 IL11P20809 199 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms