RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 ZNF232Q9UNY5 417 aa20.14■□□□□ 0.81
PTCD3-203ENST00000409783 USP22Q9UPT9 525 aa20.14■□□□□ 0.81
PTCD3-203ENST00000409783 RNF6Q9Y252 685 aa20.14■□□□□ 0.81
PTCD3-203ENST00000409783 A0A0G2JNJ9 132 aa20.13■□□□□ 0.81
PTCD3-203ENST00000409783 MBD3L4A6NDZ8 208 aaPredicted RBP20.13■□□□□ 0.81
PTCD3-203ENST00000409783 MBD3L3A6NE82 208 aaPredicted RBP20.13■□□□□ 0.81
PTCD3-203ENST00000409783 MBD3L5A6NJ08 208 aaPredicted RBP20.13■□□□□ 0.81
PTCD3-203ENST00000409783 CLCA1A8K7I4 914 aa20.13■□□□□ 0.81
PTCD3-203ENST00000409783 TPST1O60507 370 aa20.13■□□□□ 0.81
PTCD3-203ENST00000409783 DCTN3O75935 186 aa20.13■□□□□ 0.81
PTCD3-203ENST00000409783 SHC1P29353 583 aa20.13■□□□□ 0.81
PTCD3-203ENST00000409783 AQP1P29972 269 aa20.13■□□□□ 0.81
PTCD3-203ENST00000409783 PRKAR1BP31321 381 aa20.13■□□□□ 0.81
PTCD3-203ENST00000409783 CEACAM8P31997 349 aaPredicted RBP20.13■□□□□ 0.81
PTCD3-203ENST00000409783 SLC6A8P48029 635 aa20.13■□□□□ 0.81
PTCD3-203ENST00000409783 SMSP52788 366 aa20.13■□□□□ 0.81
PTCD3-203ENST00000409783 SF3B4Q15427 424 aaKnown RBP eCLIP20.13■□□□□ 0.812e-6■■■□□ 16.4
PTCD3-203ENST00000409783 VMACQ2NL98 169 aa20.13■□□□□ 0.81
PTCD3-203ENST00000409783 RIPPLY2Q5TAB7 128 aa20.13■□□□□ 0.81
PTCD3-203ENST00000409783 GKAP1Q5VSY0 366 aaPredicted RBP20.13■□□□□ 0.81
PTCD3-203ENST00000409783 DHRS4L2Q6PKH6 230 aa20.13■□□□□ 0.81
PTCD3-203ENST00000409783 XKRXQ6PP77 449 aa20.13■□□□□ 0.81
PTCD3-203ENST00000409783 PLXDC2Q6UX71 529 aa20.13■□□□□ 0.81
PTCD3-203ENST00000409783 SLC15A3Q8IY34 581 aa20.13■□□□□ 0.81
PTCD3-203ENST00000409783 MEIOBQ8N635 442 aa20.13■□□□□ 0.81
PTCD3-203ENST00000409783 TNIP2Q8NFZ5 429 aa20.13■□□□□ 0.81
PTCD3-203ENST00000409783 MBD3L2Q8NHZ7 208 aaPredicted RBP20.13■□□□□ 0.81
PTCD3-203ENST00000409783 SMPDL3BQ92485 455 aa20.13■□□□□ 0.81
PTCD3-203ENST00000409783 ECSITQ9BQ95 431 aa20.13■□□□□ 0.81
PTCD3-203ENST00000409783 PIF1Q9H611 641 aa20.13■□□□□ 0.81
PTCD3-203ENST00000409783 Q9UFV3 132 aa20.13■□□□□ 0.81
PTCD3-203ENST00000409783 ANGPT4Q9Y264 503 aa20.13■□□□□ 0.81
PTCD3-203ENST00000409783 CACNA1CQ13936 2221 aa20.12■□□□□ 0.81
PTCD3-203ENST00000409783 CFAP73A6NFT4 308 aa20.12■□□□□ 0.81
PTCD3-203ENST00000409783 ADAMDEC1O15204 470 aa20.12■□□□□ 0.81
PTCD3-203ENST00000409783 SEC14L5O43304 696 aa20.12■□□□□ 0.81
PTCD3-203ENST00000409783 MFN2O95140 757 aa20.12■□□□□ 0.81
PTCD3-203ENST00000409783 CLDN1O95832 211 aa20.12■□□□□ 0.81
PTCD3-203ENST00000409783 OPN1LWP04000 364 aa20.12■□□□□ 0.81
PTCD3-203ENST00000409783 GKN3PP0CG01 181 aa20.12■□□□□ 0.81
PTCD3-203ENST00000409783 PRG2P13727 222 aa20.12■□□□□ 0.81
PTCD3-203ENST00000409783 TIMP3P35625 211 aa20.12■□□□□ 0.81
PTCD3-203ENST00000409783 DMTNQ08495 405 aa20.12■□□□□ 0.81
PTCD3-203ENST00000409783 PLEKHM3Q6ZWE6 761 aa20.12■□□□□ 0.81
PTCD3-203ENST00000409783 KRT73Q86Y46 540 aa20.12■□□□□ 0.81
PTCD3-203ENST00000409783 CCDC71Q8IV32 467 aaPredicted RBP20.12■□□□□ 0.81
PTCD3-203ENST00000409783 ZNF440Q8IYI8 595 aa20.12■□□□□ 0.81
PTCD3-203ENST00000409783 NAXEQ8NCW5 288 aa20.12■□□□□ 0.81
PTCD3-203ENST00000409783 TMEM234Q8WY98 164 aa20.12■□□□□ 0.81
PTCD3-203ENST00000409783 REXO5Q96IC2 774 aaKnown RBP20.12■□□□□ 0.81
PTCD3-203ENST00000409783 TMEM185BQ9H7F4 350 aa20.12■□□□□ 0.81
PTCD3-203ENST00000409783 UTP20O75691 2785 aaKnown RBP20.12■□□□□ 0.81
PTCD3-203ENST00000409783 A0A0J9YW62 118 aa20.11■□□□□ 0.81
PTCD3-203ENST00000409783 CCT8L1PA6NM43 557 aa20.11■□□□□ 0.81
PTCD3-203ENST00000409783 IDH2P48735 452 aaKnown RBP20.11■□□□□ 0.81
PTCD3-203ENST00000409783 NUDT2P50583 147 aa20.11■□□□□ 0.81
PTCD3-203ENST00000409783 CRYBA2P53672 197 aa20.11■□□□□ 0.81
PTCD3-203ENST00000409783 GLIPR1L2Q4G1C9 344 aa20.11■□□□□ 0.81
PTCD3-203ENST00000409783 SLC30A8Q8IWU4 369 aa20.11■□□□□ 0.81
PTCD3-203ENST00000409783 LILRA2Q8N149 483 aa20.11■□□□□ 0.81
PTCD3-203ENST00000409783 C9orf106Q8NAJ2 232 aa20.11■□□□□ 0.81
PTCD3-203ENST00000409783 SLC35B4Q969S0 331 aa20.11■□□□□ 0.81
PTCD3-203ENST00000409783 SDCCAG3Q96C92 435 aa20.11■□□□□ 0.81
PTCD3-203ENST00000409783 ZNF845Q96IR2 970 aaPredicted RBP20.11■□□□□ 0.81
PTCD3-203ENST00000409783 ZNF607Q96SK3 696 aa20.11■□□□□ 0.81
PTCD3-203ENST00000409783 HOPXQ9BPY8 73 aaPredicted RBP20.11■□□□□ 0.81
PTCD3-203ENST00000409783 SPATA5L1Q9BVQ7 753 aa20.11■□□□□ 0.81
PTCD3-203ENST00000409783 ARL8BQ9NVJ2 186 aa20.11■□□□□ 0.81
PTCD3-203ENST00000409783 GMPR2Q9P2T1 348 aaKnown RBP20.11■□□□□ 0.81
PTCD3-203ENST00000409783 INTS1Q8N201 2190 aaKnown RBP20.1■□□□□ 0.81
PTCD3-203ENST00000409783 M0QX08 132 aa20.1■□□□□ 0.81
PTCD3-203ENST00000409783 FRS3O43559 492 aa20.1■□□□□ 0.81
PTCD3-203ENST00000409783 TGM6O95932 706 aa20.1■□□□□ 0.81
PTCD3-203ENST00000409783 EEFSECP57772 596 aaKnown RBP20.1■□□□□ 0.81
PTCD3-203ENST00000409783 MERTKQ12866 999 aa20.1■□□□□ 0.81
PTCD3-203ENST00000409783 SELENBP1Q13228 472 aa20.1■□□□□ 0.81
PTCD3-203ENST00000409783 POMZP3Q6PJE2 187 aa20.1■□□□□ 0.81
PTCD3-203ENST00000409783 ESPNLQ6ZVH7 1005 aa20.1■□□□□ 0.81
PTCD3-203ENST00000409783 CCDC80Q76M96 950 aa20.1■□□□□ 0.81
PTCD3-203ENST00000409783 GRINAQ7Z429 371 aa20.1■□□□□ 0.81
PTCD3-203ENST00000409783 ARPINQ7Z6K5 226 aa20.1■□□□□ 0.81
PTCD3-203ENST00000409783 LSRQ86X29 649 aaPredicted RBP20.1■□□□□ 0.81
PTCD3-203ENST00000409783 FITM2Q8N6M3 262 aa20.1■□□□□ 0.81
PTCD3-203ENST00000409783 CCDC197Q8NCU1 140 aa20.1■□□□□ 0.81
PTCD3-203ENST00000409783 ZNF563Q8TA94 476 aa20.1■□□□□ 0.81
PTCD3-203ENST00000409783 WNT2BQ93097 391 aa20.1■□□□□ 0.81
PTCD3-203ENST00000409783 KLHL15Q96M94 604 aa20.1■□□□□ 0.81
PTCD3-203ENST00000409783 CACYBPQ9HB71 228 aaKnown RBP20.1■□□□□ 0.81
PTCD3-203ENST00000409783 CTPS2Q9NRF8 586 aa20.1■□□□□ 0.81
PTCD3-203ENST00000409783 STOML1Q9UBI4 398 aa20.1■□□□□ 0.81
PTCD3-203ENST00000409783 PRDM4Q9UKN5 801 aa20.1■□□□□ 0.81
PTCD3-203ENST00000409783 FAM220BPB1ANY3 271 aa20.09■□□□□ 0.81
PTCD3-203ENST00000409783 NME4O00746 187 aa20.09■□□□□ 0.81
PTCD3-203ENST00000409783 EIF1AYO14602 144 aaKnown RBP20.09■□□□□ 0.81
PTCD3-203ENST00000409783 GP1BBP13224 206 aa20.09■□□□□ 0.81
PTCD3-203ENST00000409783 ME2P23368 584 aa20.09■□□□□ 0.81
PTCD3-203ENST00000409783 SFTPDP35247 375 aa20.09■□□□□ 0.81
PTCD3-203ENST00000409783 CPA2P48052 419 aa20.09■□□□□ 0.81
PTCD3-203ENST00000409783 ZNF136P52737 540 aa20.09■□□□□ 0.81
PTCD3-203ENST00000409783 ART3Q13508 389 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms