RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 TSLPQ969D9 159 aa18.5■□□□□ 0.55
USP39-204ENST00000409766 EFHD2Q96C19 240 aaPredicted RBP18.5■□□□□ 0.55
USP39-204ENST00000409766 TNFRSF13CQ96RJ3 184 aa18.5■□□□□ 0.55
USP39-204ENST00000409766 TNFRSF10DQ9UBN6 386 aa18.5■□□□□ 0.55
USP39-204ENST00000409766 RPS6KB2Q9UBS0 482 aa18.5■□□□□ 0.55
USP39-204ENST00000409766 YARS2Q9Y2Z4 477 aaKnown RBP18.5■□□□□ 0.55
USP39-204ENST00000409766 NUP210LQ5VU65 1888 aa18.5■□□□□ 0.55
USP39-204ENST00000409766 PNMA8CA0A1B0GUJ8 204 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 SYNDIG1LA6NDD5 238 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 PLD2O14939 933 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 POLR1CO15160 346 aaPredicted RBP18.49■□□□□ 0.55
USP39-204ENST00000409766 LALBAP00709 142 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 MSL3P1P0C860 447 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 ETV6P41212 452 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 PPICP45877 212 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 CRYZQ08257 329 aaKnown RBP18.49■□□□□ 0.55
USP39-204ENST00000409766 TRIM16LQ309B1 348 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 B3GLCTQ6Y288 498 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 RTL4Q6ZR62 310 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 PRSS42Q7Z5A4 293 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 OR51G2Q8NGK0 314 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 OR52N1Q8NH53 320 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 NACC2Q96BF6 587 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 CLIP3Q96DZ5 547 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 SLC46A1Q96NT5 459 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 NDC1Q9BTX1 674 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 MCCC2Q9HCC0 563 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 SLC35A3Q9Y2D2 325 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 CACNA1EQ15878 2313 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.49■□□□□ 0.55
USP39-204ENST00000409766 A8MU76 341 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 A8MUA0 341 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 IGKV3-11P04433 115 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 EFNA3P52797 238 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 RPS25P62851 125 aaKnown RBP18.49■□□□□ 0.55
USP39-204ENST00000409766 ACSM1Q08AH1 577 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 WDR74Q6RFH5 385 aaPredicted RBP18.49■□□□□ 0.55
USP39-204ENST00000409766 GPR135Q8IZ08 494 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 KLHL36Q8N4N3 616 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 PARP16Q8N5Y8 322 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 SLC37A3Q8NCC5 494 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 FAM71CQ8NEG0 241 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 KISS1RQ969F8 398 aaPredicted RBP18.49■□□□□ 0.55
USP39-204ENST00000409766 ELF4Q99607 663 aaPredicted RBP18.49■□□□□ 0.55
USP39-204ENST00000409766 KCNS3Q9BQ31 491 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 BAIAP2Q9UQB8 552 aa18.49■□□□□ 0.55
USP39-204ENST00000409766 A0A087WUJ7 227 aa18.48■□□□□ 0.55
USP39-204ENST00000409766 ZC3H12DA2A288 527 aaKnown RBP18.48■□□□□ 0.55
USP39-204ENST00000409766 CTDSP2O14595 271 aa18.48■□□□□ 0.55
USP39-204ENST00000409766 LRRTM2O43300 516 aa18.48■□□□□ 0.55
USP39-204ENST00000409766 UPK1BO75841 260 aa18.48■□□□□ 0.55
USP39-204ENST00000409766 GABRA5P31644 462 aa18.48■□□□□ 0.55
USP39-204ENST00000409766 RORAP35398 523 aa18.48■□□□□ 0.55
USP39-204ENST00000409766 ADH7P40394 386 aa18.48■□□□□ 0.55
USP39-204ENST00000409766 RORCP51449 518 aa18.48■□□□□ 0.55
USP39-204ENST00000409766 GPR143P51810 404 aa18.48■□□□□ 0.55
USP39-204ENST00000409766 FNDC7Q5VTL7 733 aa18.48■□□□□ 0.55
USP39-204ENST00000409766 KMT5CQ86Y97 462 aa18.48■□□□□ 0.55
USP39-204ENST00000409766 GATAD2AQ86YP4 633 aa18.48■□□□□ 0.55
USP39-204ENST00000409766 SLC43A2Q8N370 569 aa18.48■□□□□ 0.55
USP39-204ENST00000409766 OR4C6Q8NH72 309 aa18.48■□□□□ 0.55
USP39-204ENST00000409766 DNAJA4Q8WW22 397 aaPredicted RBP18.48■□□□□ 0.55
USP39-204ENST00000409766 OR8D2Q9GZM6 311 aa18.48■□□□□ 0.55
USP39-204ENST00000409766 HOXD1Q9GZZ0 328 aa18.48■□□□□ 0.55
USP39-204ENST00000409766 NXF5Q9H1B4 397 aaKnown RBP18.48■□□□□ 0.55
USP39-204ENST00000409766 ZNF304Q9HCX3 659 aa18.48■□□□□ 0.55
USP39-204ENST00000409766 UBQLN4Q9NRR5 601 aa18.48■□□□□ 0.55
USP39-204ENST00000409766 SNTG1Q9NSN8 517 aa18.48■□□□□ 0.55
USP39-204ENST00000409766 RHBDL2Q9NX52 303 aa18.48■□□□□ 0.55
USP39-204ENST00000409766 CRNNQ9UBG3 495 aaPredicted RBP18.48■□□□□ 0.55
USP39-204ENST00000409766 CLCA3PQ9Y6N3 262 aa18.48■□□□□ 0.55
USP39-204ENST00000409766 ADAMTS20P59510 1910 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 SAGE2PA6NJ88 616 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 PRR23D1E9PI22 279 aaPredicted RBP18.47■□□□□ 0.55
USP39-204ENST00000409766 PPP1R3DO95685 299 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 IL33O95760 270 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 DDAH2O95865 285 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 PRR23D2P0DMB1 279 aaPredicted RBP18.47■□□□□ 0.55
USP39-204ENST00000409766 PEPDP12955 493 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 PAICSP22234 425 aaKnown RBP18.47■□□□□ 0.55
USP39-204ENST00000409766 ZNF791Q3KP31 576 aaPredicted RBP18.47■□□□□ 0.55
USP39-204ENST00000409766 ARMC4Q5T2S8 1044 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 C22orf42Q6IC83 251 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 CD200R1LQ6Q8B3 271 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 CCDC190Q86UF4 302 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 ZNF440Q8IYI8 595 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 SLC2A12Q8TD20 617 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 ZNF721Q8TF20 911 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 OIT3Q8WWZ8 545 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 PPP1R14BQ96C90 147 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 C1GALT1C1Q96EU7 318 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 TM9SF2Q99805 663 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 SERTAD3Q9UJW9 196 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 ICAM5Q9UMF0 924 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 FER1L5A0AVI2 2057 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 TCRBV16S1A1N1A0A5B0 115 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 RIIAD1A6NNX1 92 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 GNB5O14775 395 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 SLC30A4O14863 429 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 DYRK3O43781 588 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms