RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 GDF1P27539 372 aa14.99□□□□□ -0.01
TSPAN4-208ENST00000409531 SRD5A2P31213 254 aa14.99□□□□□ -0.01
TSPAN4-208ENST00000409531 ACAA2P42765 397 aaKnown RBP14.99□□□□□ -0.01
TSPAN4-208ENST00000409531 ZNF136P52737 540 aa14.99□□□□□ -0.01
TSPAN4-208ENST00000409531 DEF8Q6ZN54 512 aa14.99□□□□□ -0.01
TSPAN4-208ENST00000409531 ZDHHC21Q8IVQ6 265 aa14.99□□□□□ -0.01
TSPAN4-208ENST00000409531 LSMEM1Q8N8F7 131 aa14.99□□□□□ -0.01
TSPAN4-208ENST00000409531 PRR7Q8TB68 274 aa14.99□□□□□ -0.01
TSPAN4-208ENST00000409531 ST8SIA1Q92185 356 aa14.99□□□□□ -0.01
TSPAN4-208ENST00000409531 C1GALT1C1Q96EU7 318 aa14.99□□□□□ -0.01
TSPAN4-208ENST00000409531 MCHR1Q99705 422 aa14.99□□□□□ -0.01
TSPAN4-208ENST00000409531 ZNF703Q9H7S9 590 aaPredicted RBP14.99□□□□□ -0.01
TSPAN4-208ENST00000409531 TMEM27Q9HBJ8 222 aa14.99□□□□□ -0.01
TSPAN4-208ENST00000409531 CCM2LQ9NUG4 571 aaPredicted RBP14.99□□□□□ -0.01
TSPAN4-208ENST00000409531 TAS2R10Q9NYW0 307 aa14.99□□□□□ -0.01
TSPAN4-208ENST00000409531 RPS6KB2Q9UBS0 482 aa14.99□□□□□ -0.01
TSPAN4-208ENST00000409531 MRPS18CQ9Y3D5 142 aaKnown RBP14.99□□□□□ -0.01
TSPAN4-208ENST00000409531 POLEQ07864 2286 aa14.99□□□□□ -0.01
TSPAN4-208ENST00000409531 CLEC18AA5D8T8 446 aa14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 GP1BBP13224 206 aa14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 PRG2P13727 222 aa14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 SLC7A1P30825 629 aa14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 EIF1P41567 113 aaKnown RBP14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 IDH2P48735 452 aaKnown RBP14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 ERFP50548 548 aa14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 PPIAP62937 165 aaKnown RBP14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 PMP22Q01453 160 aa14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 QPRTQ15274 297 aa14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 TOMM20Q15388 145 aa14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 GLYR1Q49A26 553 aaPredicted RBP14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 WBP2NLQ6ICG8 309 aa14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 ZFP1Q6P2D0 407 aa14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 CLEC18BQ6UXF7 455 aa14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 PLEKHM3Q6ZWE6 761 aa14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 PIWIL3Q7Z3Z3 882 aaKnown RBP14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 LACC1Q8IV20 430 aa14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 CLEC18CQ8NCF0 446 aa14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 OR4D11Q8NGI4 311 aa14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 STMN2Q93045 179 aa14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 ZBTB8AQ96BR9 441 aa14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 DUS3LQ96G46 650 aaKnown RBP14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 C7orf34Q96L11 122 aa14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 ZNF347Q96SE7 839 aa14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 AMBRA1Q9C0C7 1298 aa14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 UBQLN3Q9H347 655 aa14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 MED17Q9NVC6 651 aa14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 SELENONQ9NZV5 590 aa14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 ENPP4Q9Y6X5 453 aa14.98□□□□□ -0.01
TSPAN4-208ENST00000409531 H0YHG0 523 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 hCG_2039718K7EN88 272 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 CDC40O60508 579 aaKnown RBP eCLIP14.97□□□□□ -0.012e-6■■■■■ 31.7
TSPAN4-208ENST00000409531 ADAM11O75078 769 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 ZNF24P17028 368 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 RHCEP18577 417 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 MST1P26927 711 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 SLC1A3P43003 542 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 MAGEA2P43356 314 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 HTR3AP46098 478 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 TDGF1P3P51864 188 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 TAS2R41P59536 307 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 VLDLRP98155 873 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 HOXC5Q00444 222 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 SRSF1Q07955 248 aaKnown RBP eCLIP14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 NPTX1Q15818 432 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 PLPPR5Q32ZL2 321 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 ENTPD8Q5MY95 495 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 ZNF613Q6PF04 617 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 RBM45Q8IUH3 476 aaKnown RBP14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 CADM2Q8N3J6 435 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 FAM109AQ8N4B1 249 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 FAM26EQ8N5C1 309 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 TMEM251Q8N6I4 163 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 PAPD5Q8NDF8 572 aaKnown RBP14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 DNAJA4Q8WW22 397 aaPredicted RBP14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 MRGPRX4Q96LA9 322 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 PRRC1Q96M27 445 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 ZNF300Q96RE9 604 aaPredicted RBP14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 WFDC6Q9BQY6 131 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 CHID1Q9BWS9 393 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 ACER3Q9NUN7 267 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 NDUFAF4Q9P032 175 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 VDAC3Q9Y277 283 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 AP4S1Q9Y587 144 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 HRH3Q9Y5N1 445 aa14.97□□□□□ -0.01
TSPAN4-208ENST00000409531 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 C7orf72A4D263 438 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 TRAPPC13A5PLN9 417 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 CPSF4LA6NMK7 179 aaKnown RBP14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 FAM166BA8MTA8 275 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 B4DXG7 233 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 ETV2O00321 342 aaPredicted RBP14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 TFECO14948 347 aaPredicted RBP14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 FKBP6O75344 327 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 ENTPD5O75356 428 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 TRAPPC6AO75865 159 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 OR5F1O95221 314 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 RFPL3SP0C7P2 107 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 PRKCAP17252 672 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 HK1P19367 917 aa14.96□□□□□ -0.01
TSPAN4-208ENST00000409531 HTR2AP28223 471 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms