RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 NACC2Q96BF6 587 aa19.02■□□□□ 0.64
USP39-203ENST00000409470 OR6C1Q96RD1 312 aa19.02■□□□□ 0.64
USP39-203ENST00000409470 HMG20AQ9NP66 347 aa19.02■□□□□ 0.64
USP39-203ENST00000409470 CLDN25C9JDP6 229 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 SOCS6O14544 535 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 ATP6V1E1P36543 226 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 WNT4P56705 351 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 DCAF7P61962 342 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 ZNF846Q147U1 533 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 ANKDD1AQ495B1 522 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 RHBDD2Q6NTF9 364 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 SHISA6Q6ZSJ9 500 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 TMCO5AQ8N6Q1 288 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 OR4D9Q8NGE8 314 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 ADOQ96SZ5 270 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 EXOSC4Q9NPD3 245 aaKnown RBP19.01■□□□□ 0.63
USP39-203ENST00000409470 CORINQ9Y5Q5 1042 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 GTPBP1O00178 669 aaKnown RBP19.01■□□□□ 0.63
USP39-203ENST00000409470 YKT6O15498 198 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 PTP4A3O75365 173 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 ANKRD34CP0C6C1 535 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 UBL4AP11441 157 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 CCR4P51679 360 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 SIGLEC14Q08ET2 396 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 EBPQ15125 230 aaKnown RBP19.01■□□□□ 0.63
USP39-203ENST00000409470 CD226Q15762 336 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 FAAH2Q6GMR7 532 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 RABEPKQ7Z6M1 372 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 GID4Q8IVV7 300 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 AMER2Q8N7J2 671 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 FAM181AQ8N9Y4 354 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 OR4F15Q8NGB8 312 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 OR6Q1Q8NGQ2 317 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 OIT3Q8WWZ8 545 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 S100ZQ8WXG8 99 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 TNFRSF13CQ96RJ3 184 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 NRSN2Q9GZP1 204 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 LRRN3Q9H3W5 708 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 FN3KQ9H479 309 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 VCANP13611 3396 aa19.01■□□□□ 0.63
USP39-203ENST00000409470 TMEM129A0AVI4 362 aa19■□□□□ 0.63
USP39-203ENST00000409470 CDC14CA4D256 554 aa19■□□□□ 0.63
USP39-203ENST00000409470 REM1O75628 298 aa19■□□□□ 0.63
USP39-203ENST00000409470 PSMA1P25786 263 aaKnown RBP19■□□□□ 0.63
USP39-203ENST00000409470 ADH7P40394 386 aa19■□□□□ 0.63
USP39-203ENST00000409470 LIMK1P53667 647 aa19■□□□□ 0.63
USP39-203ENST00000409470 FOXK2Q01167 660 aa19■□□□□ 0.63
USP39-203ENST00000409470 OR2G6Q5TZ20 316 aa19■□□□□ 0.63
USP39-203ENST00000409470 LIPKQ5VXJ0 399 aa19■□□□□ 0.63
USP39-203ENST00000409470 COX15Q7KZN9 410 aa19■□□□□ 0.63
USP39-203ENST00000409470 C9orf40Q8IXQ3 194 aa19■□□□□ 0.63
USP39-203ENST00000409470 NAT6Q93015 286 aa19■□□□□ 0.63
USP39-203ENST00000409470 HSPBAP1Q96EW2 488 aa19■□□□□ 0.63
USP39-203ENST00000409470 SEC14L4Q9UDX3 406 aa19■□□□□ 0.63
USP39-203ENST00000409470 A0A087WUJ7 227 aa19■□□□□ 0.63
USP39-203ENST00000409470 IGHV5-10-1A0A0J9YXX1 117 aa19■□□□□ 0.63
USP39-203ENST00000409470 GPX5O75715 221 aa19■□□□□ 0.63
USP39-203ENST00000409470 IL12BP29460 328 aa19■□□□□ 0.63
USP39-203ENST00000409470 NR0B1P51843 470 aaKnown RBP19■□□□□ 0.63
USP39-203ENST00000409470 ZNF404Q494X3 552 aa19■□□□□ 0.63
USP39-203ENST00000409470 FNDC7Q5VTL7 733 aa19■□□□□ 0.63
USP39-203ENST00000409470 RTL4Q6ZR62 310 aa19■□□□□ 0.63
USP39-203ENST00000409470 LANCL3Q6ZV70 420 aa19■□□□□ 0.63
USP39-203ENST00000409470 SLC29A4Q7RTT9 530 aa19■□□□□ 0.63
USP39-203ENST00000409470 C1orf210Q8IVY1 113 aa19■□□□□ 0.63
USP39-203ENST00000409470 MAML2Q8IZL2 1156 aaPredicted RBP19■□□□□ 0.63
USP39-203ENST00000409470 FAM71CQ8NEG0 241 aa19■□□□□ 0.63
USP39-203ENST00000409470 OR1N1Q8NGS0 311 aa19■□□□□ 0.63
USP39-203ENST00000409470 OR2I1PQ8NGU4 316 aa19■□□□□ 0.63
USP39-203ENST00000409470 GATAD2BQ8WXI9 593 aa19■□□□□ 0.63
USP39-203ENST00000409470 SGTBQ96EQ0 304 aa19■□□□□ 0.63
USP39-203ENST00000409470 WDR12Q9GZL7 423 aaKnown RBP19■□□□□ 0.63
USP39-203ENST00000409470 MED20Q9H944 212 aa19■□□□□ 0.63
USP39-203ENST00000409470 CMC2Q9NRP2 79 aa19■□□□□ 0.63
USP39-203ENST00000409470 SLC22A11Q9NSA0 550 aa19■□□□□ 0.63
USP39-203ENST00000409470 NDUFB11Q9NX14 153 aa19■□□□□ 0.63
USP39-203ENST00000409470 FER1L5A0AVI2 2057 aa18.99■□□□□ 0.63
USP39-203ENST00000409470 PPP1R3DO95685 299 aa18.99■□□□□ 0.63
USP39-203ENST00000409470 TSPAN19P0C672 248 aa18.99■□□□□ 0.63
USP39-203ENST00000409470 ENDOUP21128 410 aaKnown RBP18.99■□□□□ 0.63
USP39-203ENST00000409470 PRPF38BQ5VTL8 546 aaKnown RBP18.99■□□□□ 0.63
USP39-203ENST00000409470 LHFPL3Q86UP9 236 aa18.99■□□□□ 0.63
USP39-203ENST00000409470 PLPP5Q8NEB5 264 aa18.99■□□□□ 0.63
USP39-203ENST00000409470 STT3BQ8TCJ2 826 aa18.99■□□□□ 0.63
USP39-203ENST00000409470 C3orf49Q96BT1 292 aa18.99■□□□□ 0.63
USP39-203ENST00000409470 CCDC74BQ96LY2 380 aa18.99■□□□□ 0.63
USP39-203ENST00000409470 AKIP1Q9NQ31 210 aa18.99■□□□□ 0.63
USP39-203ENST00000409470 FBXO8Q9NRD0 319 aa18.99■□□□□ 0.63
USP39-203ENST00000409470 RARRES3Q9UL19 164 aa18.99■□□□□ 0.63
USP39-203ENST00000409470 EXOGQ9Y2C4 368 aaKnown RBP18.99■□□□□ 0.63
USP39-203ENST00000409470 SPIN1Q9Y657 262 aaPredicted RBP18.99■□□□□ 0.63
USP39-203ENST00000409470 RIIAD1A6NNX1 92 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 WWP2O00308 870 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 ZNF264O43296 627 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 SCRG1O75711 98 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 LIMS3P0CW19 117 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 LIMS4P0CW20 117 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 PAICSP22234 425 aaKnown RBP18.98■□□□□ 0.63
USP39-203ENST00000409470 NOS3P29474 1203 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 SLC6A6P31641 620 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms