RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 PDCD11Q14690 1871 aaKnown RBP11.32□□□□□ -0.6
SMCR8-201ENST00000406438 A8MVM7 634 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 M0R3H8 397 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 SRPX2O60687 465 aaPredicted RBP11.32□□□□□ -0.6
SMCR8-201ENST00000406438 FUT1P19526 365 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 CPOXP36551 454 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 VASPP50552 380 aaPredicted RBP11.32□□□□□ -0.6
SMCR8-201ENST00000406438 GALNT1Q10472 559 aaPredicted RBP11.32□□□□□ -0.6
SMCR8-201ENST00000406438 LETMD1Q6P1Q0 360 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 ZNF765Q7L2R6 523 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 TECPR1Q7Z6L1 1165 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 MKXQ8IYA7 352 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 OR7G3Q8NG95 312 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 NETO1Q8TDF5 533 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 SLAMF9Q96A28 289 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 ZNF355PQ9NSJ1 428 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 CNOT11Q9UKZ1 510 aaKnown RBP11.32□□□□□ -0.6
SMCR8-201ENST00000406438 BOLA2-SMG1P6H3BVE0 249 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 PRAF2O60831 178 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 ZFAND5O76080 213 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 PRPH2P23942 346 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 PRKAR1BP31321 381 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 SQSTM1Q13501 440 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 LPAL2Q16609 132 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 CST9LP1Q5W188 147 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 C7orf43Q8WVR3 580 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 SLC38A1Q9H2H9 487 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 SMOXQ9NWM0 555 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 SLC10A2Q12908 348 aaPredicted RBP11.32□□□□□ -0.6
SMCR8-201ENST00000406438 MOGSQ13724 837 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 GPRIN1Q7Z2K8 1008 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 PITHD1Q9GZP4 211 aaPredicted RBP11.32□□□□□ -0.6
SMCR8-201ENST00000406438 EVA1AQ9H8M9 152 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 RFPL3O75679 317 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 ZIC2O95409 532 aaPredicted RBP11.32□□□□□ -0.6
SMCR8-201ENST00000406438 NPBWR1P48145 328 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 RAB11AP62491 216 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 IER5LQ5T953 404 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 PLAG1Q6DJT9 500 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 DLK2Q6UY11 383 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 MFSD6LQ8IWD5 586 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 NAT6Q93015 286 aa11.32□□□□□ -0.6
SMCR8-201ENST00000406438 ENSAO43768 121 aaKnown RBP11.31□□□□□ -0.6
SMCR8-201ENST00000406438 UPK1BO75841 260 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 NUDT7P0C024 238 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 EVI2BP34910 448 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 DCAF12Q5T6F0 453 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 GDPGP1Q6ZNW5 385 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 CPOQ8IVL8 374 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 MMP21Q8N119 569 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 NAGSQ8N159 534 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 PPA2Q9H2U2 334 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 GLTPQ9NZD2 209 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 SLC22A7Q9Y694 548 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 CBX7O95931 251 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 CAPNS1P04632 268 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 TNFRSF4P43489 277 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 C6orf132Q5T0Z8 1188 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 FAM160A2Q8N612 972 aaPredicted RBP11.31□□□□□ -0.6
SMCR8-201ENST00000406438 ACOT4Q8N9L9 421 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 FNDC8Q8TC99 324 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 PIGCQ92535 297 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 MIB2Q96AX9 1013 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 ISG20Q96AZ6 181 aaKnown RBP11.31□□□□□ -0.6
SMCR8-201ENST00000406438 BSCL2Q96G97 398 aaPredicted RBP11.31□□□□□ -0.6
SMCR8-201ENST00000406438 NKX2-4Q9H2Z4 354 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 NMNAT1Q9HAN9 279 aaPredicted RBP11.31□□□□□ -0.6
SMCR8-201ENST00000406438 LMAN1LQ9HAT1 526 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 INIPQ9NRY2 104 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 GJD2Q9UKL4 321 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 F5P12259 2224 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 NUDT21O43809 227 aaKnown RBP11.31□□□□□ -0.6
SMCR8-201ENST00000406438 SLX4IPQ5VYV7 408 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 TERB2Q8NHR7 220 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 RTP3Q9BQQ7 232 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 BOCQ9BWV1 1114 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 SMCO4Q9NRQ5 59 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 INPP5EQ9NRR6 644 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 GPATCH2Q9NW75 528 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 E7ESA3 106 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 GABARAPH6UMI1 98 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 GABARAPO95166 117 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 TMEM244Q5VVB8 128 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 VASNQ6EMK4 673 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 SKA3Q8IX90 412 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 CMIPQ8IY22 773 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 DMBX1Q8NFW5 382 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 MICU1Q9BPX6 476 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 STARD5Q9NSY2 213 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 LYRM1O43325 122 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 TUSC2O75896 110 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 OLFM2O95897 454 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 CXCR4P61073 352 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 FGFBP1Q14512 234 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 BRICD5Q6PL45 260 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 CREB3L2Q70SY1 520 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 RNF175Q8N4F7 328 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 CYB561A3Q8NBI2 242 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 ADOQ96SZ5 270 aa11.31□□□□□ -0.6
SMCR8-201ENST00000406438 OR6C2Q9NZP2 312 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms