RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 ARL14Q8N4G2 192 aa9.09□□□□□ -0.96
MSH2-202ENST00000406134 RPS4Y2Q8TD47 263 aa9.09□□□□□ -0.96
MSH2-202ENST00000406134 CNOT9Q92600 299 aaKnown RBP9.09□□□□□ -0.96
MSH2-202ENST00000406134 BPIFA2Q96DR5 249 aa9.09□□□□□ -0.96
MSH2-202ENST00000406134 C4orf36Q96KX1 117 aa9.09□□□□□ -0.96
MSH2-202ENST00000406134 STACQ99469 402 aa9.09□□□□□ -0.96
MSH2-202ENST00000406134 SLA2Q9H6Q3 261 aa9.09□□□□□ -0.96
MSH2-202ENST00000406134 LYRM4Q9HD34 91 aa9.09□□□□□ -0.96
MSH2-202ENST00000406134 DDX28Q9NUL7 540 aaKnown RBP9.09□□□□□ -0.96
MSH2-202ENST00000406134 DNAJB12Q9NXW2 375 aaKnown RBP9.09□□□□□ -0.96
MSH2-202ENST00000406134 CHRNA9Q9UGM1 479 aa9.09□□□□□ -0.96
MSH2-202ENST00000406134 MOSPD1Q9UJG1 213 aa9.09□□□□□ -0.96
MSH2-202ENST00000406134 ZNF780AO75290 641 aaPredicted RBP9.08□□□□□ -0.96
MSH2-202ENST00000406134 GYPBP06028 91 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 CELA2BP08218 269 aaPredicted RBP9.08□□□□□ -0.96
MSH2-202ENST00000406134 SRP9P49458 86 aaKnown RBP9.08□□□□□ -0.96
MSH2-202ENST00000406134 SGCGQ13326 291 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 NFATC4Q14934 902 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 C9orf50Q5SZB4 431 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 OR51Q1Q8NH59 317 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 ZPLD1Q8TCW7 415 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 UBASH3BQ8TF42 649 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 PTCHD1Q96NR3 888 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 MCUBQ9NWR8 336 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 HAO2Q9NYQ3 351 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 USP36Q9P275 1121 aaKnown RBP9.08□□□□□ -0.96
MSH2-202ENST00000406134 EXTL2Q9UBQ6 330 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 HEBP2Q9Y5Z4 205 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 C4orf47A7E2U8 309 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 H0YGG7 62 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 C1QBP02746 253 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 HMGN1P05114 100 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 DBIP07108 87 aaKnown RBP9.08□□□□□ -0.96
MSH2-202ENST00000406134 NPR2P20594 1047 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 GDI1P31150 447 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 TNFRSF4P43489 277 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 ARF3P61204 181 aaPredicted RBP9.08□□□□□ -0.96
MSH2-202ENST00000406134 RRAS2P62070 204 aaPredicted RBP9.08□□□□□ -0.96
MSH2-202ENST00000406134 CAMK2BQ13554 666 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 QPRTQ15274 297 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 ZC3H14Q6PJT7 736 aaKnown RBP9.08□□□□□ -0.96
MSH2-202ENST00000406134 CYB561A3Q8NBI2 242 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 ELSPBP1Q96BH3 223 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 ENAMQ9NRM1 1142 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 PHF11Q9UIL8 331 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 RASD1Q9Y272 281 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 COLEC10Q9Y6Z7 277 aa9.08□□□□□ -0.96
MSH2-202ENST00000406134 A0A0A6YYJ9 748 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 SLC19A2O60779 497 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 STX11O75558 287 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 SOX30O94993 753 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 AGR2O95994 175 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 YES1P07947 543 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 KIR2DS3Q14952 304 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 ALG11Q2TAA5 492 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 IDNKQ5T6J7 187 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 ENPP7Q6UWV6 458 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 SYT9Q86SS6 491 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 OR11H7Q8NGC8 314 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 ABHD4Q8TB40 342 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 ENKURQ8TC29 256 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 CD180Q99467 661 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 WACQ9BTA9 647 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 TRAF4Q9BUZ4 470 aaPredicted RBP9.07□□□□□ -0.96
MSH2-202ENST00000406134 TCEAL2Q9H3H9 227 aaPredicted RBP9.07□□□□□ -0.96
MSH2-202ENST00000406134 SRMSQ9H3Y6 488 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 ZFP64Q9NPA5 681 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 ADAP2Q9NPF8 381 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 KLHL28Q9NXS3 571 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 ACTR10Q9NZ32 417 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 SLC9B1P1A6NJY1 282 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 NPIPB9F8W1W9 429 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 G3V3Q6 166 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 NKX2-2O95096 273 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 PPP1R3DO95685 299 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 EGFP01133 1207 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 CLPSP04118 112 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 ADRB1P08588 477 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 POLR2CP19387 275 aaPredicted RBP9.07□□□□□ -0.96
MSH2-202ENST00000406134 ACSL1P33121 698 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 SUZ12Q15022 739 aaKnown RBP9.07□□□□□ -0.96
MSH2-202ENST00000406134 FIGLAQ6QHK4 219 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 NPSR1Q6W5P4 371 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 MTSS1LQ765P7 747 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 LRRC28Q86X40 367 aaPredicted RBP9.07□□□□□ -0.96
MSH2-202ENST00000406134 RSC1A1Q92681 617 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 NACC2Q96BF6 587 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 ORAI3Q9BRQ5 295 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 GHITMQ9H3K2 345 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 SLC28A3Q9HAS3 691 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 STARD5Q9NSY2 213 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 SERTAD3Q9UJW9 196 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 OR6C70A6NIJ9 312 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 CHP2O43745 196 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 TRIM3O75382 744 aaPredicted RBP9.07□□□□□ -0.96
MSH2-202ENST00000406134 IFI6P09912 130 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 ANKRD34CP0C6C1 535 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 SLC35G6P0C7Q6 338 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 ATF1P18846 271 aa9.07□□□□□ -0.96
MSH2-202ENST00000406134 RGS1Q08116 209 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms