RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 EDEM2Q9BV94 578 aa15.07■□□□□ 0
COL4A3BP-204ENST00000405807 KLHL31Q9H511 634 aa15.07■□□□□ 0
COL4A3BP-204ENST00000405807 C19orf12Q9NSK7 152 aa15.07■□□□□ 0
COL4A3BP-204ENST00000405807 ASB6Q9NWX5 421 aa15.07■□□□□ 0
COL4A3BP-204ENST00000405807 GPR52Q9Y2T5 361 aa15.07■□□□□ 0
COL4A3BP-204ENST00000405807 KIAA1671Q9BY89 1806 aa15.07■□□□□ 0
COL4A3BP-204ENST00000405807 MKI67P46013 3256 aaKnown RBP15.07■□□□□ 0
COL4A3BP-204ENST00000405807 DENND4AQ7Z401 1863 aa15.07■□□□□ 0
COL4A3BP-204ENST00000405807 CCDC163A0A0D9SF12 145 aa15.07■□□□□ 0
COL4A3BP-204ENST00000405807 TMEM200CA6NKL6 621 aa15.07■□□□□ 0
COL4A3BP-204ENST00000405807 ANXA2P2A6NMY6 339 aa15.07■□□□□ 0
COL4A3BP-204ENST00000405807 AKR7A3O95154 331 aa15.07■□□□□ 0
COL4A3BP-204ENST00000405807 GCGRP47871 477 aa15.07■□□□□ 0
COL4A3BP-204ENST00000405807 MAT1AQ00266 395 aaKnown RBP15.07■□□□□ 0
COL4A3BP-204ENST00000405807 LRRC32Q14392 662 aa15.07■□□□□ 0
COL4A3BP-204ENST00000405807 HABP2Q14520 560 aaPredicted RBP15.07■□□□□ 0
COL4A3BP-204ENST00000405807 HENMT1Q5T8I9 393 aaKnown RBP15.07■□□□□ 0
COL4A3BP-204ENST00000405807 TMEM220Q6QAJ8 160 aa15.07■□□□□ 0
COL4A3BP-204ENST00000405807 DNAJC5GQ8N7S2 189 aa15.07■□□□□ 0
COL4A3BP-204ENST00000405807 CHST14Q8NCH0 376 aa15.07■□□□□ 0
COL4A3BP-204ENST00000405807 MORN4Q8NDC4 146 aa15.07■□□□□ 0
COL4A3BP-204ENST00000405807 SMPDL3AQ92484 453 aa15.07■□□□□ 0
COL4A3BP-204ENST00000405807 PINK1Q9BXM7 581 aa15.07■□□□□ 0
COL4A3BP-204ENST00000405807 DUSP22Q9NRW4 184 aa15.07■□□□□ 0
COL4A3BP-204ENST00000405807 P2RX2Q9UBL9 471 aa15.07■□□□□ 0
COL4A3BP-204ENST00000405807 SLC25A13Q9UJS0 675 aa15.07■□□□□ 0
COL4A3BP-204ENST00000405807 TP53TG5Q9Y2B4 290 aa15.07■□□□□ 0
COL4A3BP-204ENST00000405807 HELZP42694 1942 aaKnown RBP15.06■□□□□ 0
COL4A3BP-204ENST00000405807 GLTPD2A6NH11 291 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 KDM4EB2RXH2 506 aaPredicted RBP15.06■□□□□ 0
COL4A3BP-204ENST00000405807 GPR31O00270 319 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 SLC34A2O95436 690 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 ELK1P19419 428 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 ACSM1Q08AH1 577 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 TMEM115Q12893 351 aaPredicted RBP15.06■□□□□ 0
COL4A3BP-204ENST00000405807 HSPB3Q12988 150 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 PLA1AQ53H76 456 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 RABEPKQ7Z6M1 372 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 MRGPREQ86SM8 312 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 RFKQ969G6 155 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 UBL7Q96S82 380 aaPredicted RBP15.06■□□□□ 0
COL4A3BP-204ENST00000405807 PRR14Q9BWN1 585 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 PLA2G12AQ9BZM1 189 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 TWSG1Q9GZX9 223 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 RNF32Q9H0A6 362 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 EGLN3Q9H6Z9 239 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 MAN2C1Q9NTJ4 1040 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 SH3BGRL2Q9UJC5 107 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 POMT2Q9UKY4 750 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 SHISA3A0PJX4 238 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 CXorf65A6NEN9 183 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 PRRG1O14668 218 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 TBX19O60806 448 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 GPR3P46089 330 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 SLC6A11P48066 632 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 SYPL1Q16563 259 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 BCL2L15Q5TBC7 163 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 PRICKLE2Q7Z3G6 844 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 POGLUT1Q8NBL1 392 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 ZNF740Q8NDX6 193 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 DBF4BQ8NFT6 615 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 OR6X1Q8NH79 312 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 GLYATL1Q969I3 302 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 COL26A1Q96A83 441 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 RFT1Q96AA3 541 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 THAP7Q9BT49 309 aaPredicted RBP15.06■□□□□ 0
COL4A3BP-204ENST00000405807 CFAP97Q9P2B7 532 aa15.06■□□□□ 0
COL4A3BP-204ENST00000405807 DOCK6Q96HP0 2047 aa15.05■□□□□ 0
COL4A3BP-204ENST00000405807 EFCAB14O75071 495 aa15.05■□□□□ 0
COL4A3BP-204ENST00000405807 PPP2R1BP30154 601 aa15.05■□□□□ 0
COL4A3BP-204ENST00000405807 CDH11P55287 796 aa15.05■□□□□ 0
COL4A3BP-204ENST00000405807 RAB2AP61019 212 aa15.05■□□□□ 0
COL4A3BP-204ENST00000405807 NUTF2P61970 127 aaKnown RBP15.05■□□□□ 0
COL4A3BP-204ENST00000405807 TAP2Q03519 686 aa15.05■□□□□ 0
COL4A3BP-204ENST00000405807 FAM198BQ6UWH4 519 aa15.05■□□□□ 0
COL4A3BP-204ENST00000405807 NPSR1Q6W5P4 371 aa15.05■□□□□ 0
COL4A3BP-204ENST00000405807 ASB18Q6ZVZ8 466 aa15.05■□□□□ 0
COL4A3BP-204ENST00000405807 OR9A1PQ8NGU1 263 aa15.05■□□□□ 0
COL4A3BP-204ENST00000405807 SLAMF9Q96A28 289 aa15.05■□□□□ 0
COL4A3BP-204ENST00000405807 ZNF559Q9BR84 538 aa15.05■□□□□ 0
COL4A3BP-204ENST00000405807 SPATA5L1Q9BVQ7 753 aa15.05■□□□□ 0
COL4A3BP-204ENST00000405807 OR51B6Q9H340 312 aa15.05■□□□□ 0
COL4A3BP-204ENST00000405807 C2orf92A0A1B0GVN3 265 aa15.05■□□□□ -0
COL4A3BP-204ENST00000405807 MANSC4A6NHS7 340 aaPredicted RBP15.05■□□□□ -0
COL4A3BP-204ENST00000405807 C1orf196B1AJZ1 125 aa15.05■□□□□ -0
COL4A3BP-204ENST00000405807 DISC1C4P0D8 188 aa15.05■□□□□ -0
COL4A3BP-204ENST00000405807 B4GALT2O60909 372 aa15.05■□□□□ -0
COL4A3BP-204ENST00000405807 NR2F1P10589 423 aa15.05■□□□□ -0
COL4A3BP-204ENST00000405807 CTSAP10619 480 aa15.05■□□□□ -0
COL4A3BP-204ENST00000405807 GALP22466 123 aa15.05■□□□□ -0
COL4A3BP-204ENST00000405807 ITGA3P26006 1051 aa15.05■□□□□ -0
COL4A3BP-204ENST00000405807 IFNGR2P38484 337 aa15.05■□□□□ -0
COL4A3BP-204ENST00000405807 ACLYP53396 1101 aa15.05■□□□□ -0
COL4A3BP-204ENST00000405807 EPHB3P54753 998 aa15.05■□□□□ -0
COL4A3BP-204ENST00000405807 LSM11P83369 360 aaKnown RBP eCLIP15.05■□□□□ -0
COL4A3BP-204ENST00000405807 CRHR2Q13324 411 aa15.05■□□□□ -0
COL4A3BP-204ENST00000405807 Q6ZVU0 165 aa15.05■□□□□ -0
COL4A3BP-204ENST00000405807 DCUN1D3Q8IWE4 304 aa15.05■□□□□ -0
COL4A3BP-204ENST00000405807 PUSL1Q8N0Z8 303 aaKnown RBP15.05■□□□□ -0
COL4A3BP-204ENST00000405807 LMNTD1Q8N9Z9 388 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms