RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.38□□□□□ -1.87
RTN4-208ENST00000404909 H0YAE9 185 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 M0R129 80 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 CHP2O43745 196 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 NGFRP08138 427 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 NAGAP17050 411 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 FUT1P19526 365 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 CHMP24386 653 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 TACR3P29371 465 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 ADH7P40394 386 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 CASP3P42574 277 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 CHN2P52757 468 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 MLF1P58340 268 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 CRYZQ08257 329 aaKnown RBP3.38□□□□□ -1.87
RTN4-208ENST00000404909 C17orf67Q0P5P2 114 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 NTRK2Q16620 822 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 ELOA3BQ3SY89 546 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 WBP2NLQ6ICG8 309 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 TTC33Q6PID6 262 aaPredicted RBP3.38□□□□□ -1.87
RTN4-208ENST00000404909 LYPD8Q6UX82 237 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 LINC00696Q6ZRV3 163 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 MBOAT2Q6ZWT7 520 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 MDGA2Q7Z553 956 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 CDK20Q8IZL9 346 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 LINC00471Q8N535 108 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 C10orf53Q8N6V4 93 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 LSMEM1Q8N8F7 131 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 FAM71CQ8NEG0 241 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 TOR1AIP2Q8NFQ8 470 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 ELOA3Q8NG57 546 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 OR5W2Q8NH69 310 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 B4GALNT2Q8NHY0 566 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 DNAJA4Q8WW22 397 aaPredicted RBP3.38□□□□□ -1.87
RTN4-208ENST00000404909 TTC9Q92623 222 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 UBE2FQ969M7 185 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 C3orf49Q96BT1 292 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 DPH1Q9BZG8 443 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 GRIP2Q9C0E4 1043 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 ADNPQ9H2P0 1102 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 DSN1Q9H410 356 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 ANKRD19PQ9H560 264 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 KRCC1Q9NPI7 259 aaPredicted RBP3.38□□□□□ -1.87
RTN4-208ENST00000404909 ICAM5Q9UMF0 924 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 PCNX3Q9H6A9 2034 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 PTPRBP23467 1997 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 A0A1W2PQ72 361 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 A0A1W2PQD3 144 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 ARRDC5A6NEK1 342 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 CDC42EP2O14613 210 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 EIF4E2O60573 245 aaKnown RBP3.38□□□□□ -1.87
RTN4-208ENST00000404909 CCL3P10147 92 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 GP1BBP13224 206 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 OSMP13725 252 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 PGCP20142 388 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 ENDOUP21128 410 aaKnown RBP3.38□□□□□ -1.87
RTN4-208ENST00000404909 MYF6P23409 242 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 MST1P26927 711 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 ELK4P28324 431 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 SLC1A3P43003 542 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 OMPP47874 163 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 SLC6A8P48029 635 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 MASP1P48740 699 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 P2RX1P51575 399 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 CAMK2BQ13554 666 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 CBFBQ13951 182 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 PTGES3Q15185 160 aaKnown RBP3.38□□□□□ -1.87
RTN4-208ENST00000404909 QPRTQ15274 297 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 MEP1AQ16819 746 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 ZNF791Q3KP31 576 aaPredicted RBP3.38□□□□□ -1.87
RTN4-208ENST00000404909 CMPK2Q5EBM0 449 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 C1orf94Q6P1W5 598 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 UGT2A3Q6UWM9 527 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 ARSKQ6UWY0 536 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 THAP5Q7Z6K1 395 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 CYP4Z2PQ8N1L4 340 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 BEST3Q8N1M1 668 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 SLC15A4Q8N697 577 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 IQCF1Q8N6M8 205 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 LSM14AQ8ND56 463 aaKnown RBP3.38□□□□□ -1.87
RTN4-208ENST00000404909 ATP6V1C2Q8NEY4 427 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 OR51A7Q8NH64 312 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 CNIH3Q8TBE1 160 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 FAM81AQ8TBF8 368 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 ADAMTS17Q8TE56 1095 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 SLC35B4Q969S0 331 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 BPIFA2Q96DR5 249 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 FER1L6-AS2Q96M78 137 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 SCNM1Q9BWG6 230 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 POLR2J2Q9GZM3 115 aaKnown RBP3.38□□□□□ -1.87
RTN4-208ENST00000404909 EGLN3Q9H6Z9 239 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 EXOSC3Q9NQT5 275 aaKnown RBP3.38□□□□□ -1.87
RTN4-208ENST00000404909 IMPAD1Q9NX62 359 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 TEKT2Q9UIF3 430 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 CHCHD2Q9Y6H1 151 aaPredicted RBP3.38□□□□□ -1.87
RTN4-208ENST00000404909 MPDZO75970 2070 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 ENO4A6NNW6 628 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 SHISA8B8ZZ34 492 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 LRRN3E7EW58 273 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 SLC16A6O15403 523 aa3.38□□□□□ -1.87
RTN4-208ENST00000404909 LYPD3O95274 346 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms