RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.89□□□□□ -0.51
SDF4-203ENST00000403997 SLC35A3Q9Y2D2 325 aa11.89□□□□□ -0.51
SDF4-203ENST00000403997 CELSR1Q9NYQ6 3014 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 A0A1W2PNR3 127 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 PRAMEF27A3QJZ7 478 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 HMGN4O00479 90 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 KLF11O14901 512 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 UBDO15205 165 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 DIAPH2O60879 1101 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 DNAJA2O60884 412 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 PRKD3O94806 890 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 H6PDO95479 791 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 KRT75O95678 551 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 AGTR1P30556 359 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 CCKARP32238 428 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 RYKP34925 604 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 PGM1P36871 562 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 TXNL4AP83876 142 aaKnown RBP11.88□□□□□ -0.51
SDF4-203ENST00000403997 CHRNEQ04844 493 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 MERTKQ12866 999 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 RNPS1Q15287 305 aaKnown RBP11.88□□□□□ -0.51
SDF4-203ENST00000403997 GSTA3Q16772 222 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 KRTAP21-3Q3LHN1 58 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 TMEM201Q5SNT2 666 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 BEND4Q6ZU67 534 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 FCRLAQ7L513 359 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 MAVSQ7Z434 540 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 TUSC5Q8IXB3 177 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 ANKFN1Q8N957 763 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 ZNF563Q8TA94 476 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 PNPT1Q8TCS8 783 aaKnown RBP11.88□□□□□ -0.51
SDF4-203ENST00000403997 RNF128Q8TEB7 428 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 OIT3Q8WWZ8 545 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 ST8SIA1Q92185 356 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 PIK3IP1Q96FE7 263 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 OR5B2Q96R09 309 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 CXXC4Q9H2H0 198 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 COQ10BQ9H8M1 238 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 ACER3Q9NUN7 267 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 LIPT1Q9Y234 373 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 HIVEP1P15822 2718 aa11.88□□□□□ -0.51
SDF4-203ENST00000403997 A0A1W2PPR1 153 aa11.87□□□□□ -0.51
SDF4-203ENST00000403997 CLDN24A6NM45 220 aa11.87□□□□□ -0.51
SDF4-203ENST00000403997 ETV2O00321 342 aaPredicted RBP11.87□□□□□ -0.51
SDF4-203ENST00000403997 BCAS1O75363 584 aaPredicted RBP11.87□□□□□ -0.51
SDF4-203ENST00000403997 ATE1O95260 518 aa11.87□□□□□ -0.51
SDF4-203ENST00000403997 ANP32DO95626 131 aa11.87□□□□□ -0.51
SDF4-203ENST00000403997 NR2F1P10589 423 aa11.87□□□□□ -0.51
SDF4-203ENST00000403997 TFPIP10646 304 aa11.87□□□□□ -0.51
SDF4-203ENST00000403997 ENPP1P22413 925 aa11.87□□□□□ -0.51
SDF4-203ENST00000403997 CRYGSP22914 178 aa11.87□□□□□ -0.51
SDF4-203ENST00000403997 RAC3P60763 192 aa11.87□□□□□ -0.51
SDF4-203ENST00000403997 KCNJ10P78508 379 aa11.87□□□□□ -0.51
SDF4-203ENST00000403997 SYPL1Q16563 259 aa11.87□□□□□ -0.51
SDF4-203ENST00000403997 COX20Q5RI15 118 aa11.87□□□□□ -0.51
SDF4-203ENST00000403997 AP1ARQ63HQ0 302 aa11.87□□□□□ -0.51
SDF4-203ENST00000403997 C3orf33Q6P1S2 294 aa11.87□□□□□ -0.51
SDF4-203ENST00000403997 STAC2Q6ZMT1 411 aa11.87□□□□□ -0.51
SDF4-203ENST00000403997 PLEKHM3Q6ZWE6 761 aa11.87□□□□□ -0.51
SDF4-203ENST00000403997 SLC43A2Q8N370 569 aa11.87□□□□□ -0.51
SDF4-203ENST00000403997 ARFGAP2Q8N6H7 521 aa11.87□□□□□ -0.51
SDF4-203ENST00000403997 MBD6Q96DN6 1003 aa11.87□□□□□ -0.51
SDF4-203ENST00000403997 TRNT1Q96Q11 434 aaKnown RBP11.87□□□□□ -0.51
SDF4-203ENST00000403997 OR52B2Q96RD2 323 aa11.87□□□□□ -0.51
SDF4-203ENST00000403997 RMND5AQ9H871 391 aa11.87□□□□□ -0.51
SDF4-203ENST00000403997 MTHFD2LQ9H903 347 aaPredicted RBP11.87□□□□□ -0.51
SDF4-203ENST00000403997 SDR39U1Q9NRG7 319 aaPredicted RBP11.87□□□□□ -0.51
SDF4-203ENST00000403997 ZIM2Q9NZV7 527 aa11.87□□□□□ -0.51
SDF4-203ENST00000403997 USH1CQ9Y6N9 552 aa11.87□□□□□ -0.51
SDF4-203ENST00000403997 IGHV3-15A0A0B4J1V0 119 aa11.86□□□□□ -0.51
SDF4-203ENST00000403997 DEFB108AA8MXU0 73 aa11.86□□□□□ -0.51
SDF4-203ENST00000403997 SIAH2O43255 324 aa11.86□□□□□ -0.51
SDF4-203ENST00000403997 YES1P07947 543 aa11.86□□□□□ -0.51
SDF4-203ENST00000403997 CHRM4P08173 479 aa11.86□□□□□ -0.51
SDF4-203ENST00000403997 NID1P14543 1247 aa11.86□□□□□ -0.51
SDF4-203ENST00000403997 PPP3CBP16298 524 aa11.86□□□□□ -0.51
SDF4-203ENST00000403997 POLR2JP52435 117 aaKnown RBP11.86□□□□□ -0.51
SDF4-203ENST00000403997 DEFB113Q30KQ7 82 aa11.86□□□□□ -0.51
SDF4-203ENST00000403997 DNAJC14Q6Y2X3 702 aaPredicted RBP11.86□□□□□ -0.51
SDF4-203ENST00000403997 LRRC74BQ6ZQY2 392 aa11.86□□□□□ -0.51
SDF4-203ENST00000403997 C22orf34Q6ZV56 151 aa11.86□□□□□ -0.51
SDF4-203ENST00000403997 NUFIP2Q7Z417 695 aaKnown RBP11.86□□□□□ -0.51
SDF4-203ENST00000403997 MIER2Q8N344 545 aa11.86□□□□□ -0.51
SDF4-203ENST00000403997 FAM71CQ8NEG0 241 aa11.86□□□□□ -0.51
SDF4-203ENST00000403997 LRRC8CQ8TDW0 803 aa11.86□□□□□ -0.51
SDF4-203ENST00000403997 ITCHQ96J02 903 aa11.86□□□□□ -0.51
SDF4-203ENST00000403997 ALPK1Q96QP1 1244 aa11.86□□□□□ -0.51
SDF4-203ENST00000403997 SLC38A1Q9H2H9 487 aa11.86□□□□□ -0.51
SDF4-203ENST00000403997 GP6Q9HCN6 339 aa11.86□□□□□ -0.51
SDF4-203ENST00000403997 SLC6A13Q9NSD5 602 aa11.86□□□□□ -0.51
SDF4-203ENST00000403997 KLHL13Q9P2N7 655 aa11.86□□□□□ -0.51
SDF4-203ENST00000403997 AGAP5A6NIR3 686 aa11.85□□□□□ -0.51
SDF4-203ENST00000403997 CD99P14209 185 aa11.85□□□□□ -0.51
SDF4-203ENST00000403997 IL7RP16871 459 aa11.85□□□□□ -0.51
SDF4-203ENST00000403997 APOBEC1P41238 236 aaKnown RBP11.85□□□□□ -0.51
SDF4-203ENST00000403997 CRATP43155 626 aa11.85□□□□□ -0.51
SDF4-203ENST00000403997 IDH2P48735 452 aaKnown RBP11.85□□□□□ -0.51
SDF4-203ENST00000403997 RASGEF1BQ0VAM2 473 aa11.85□□□□□ -0.51
SDF4-203ENST00000403997 GNA13Q14344 377 aa11.85□□□□□ -0.51
SDF4-203ENST00000403997 SYT14P1Q58G82 188 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms