RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 PEPDP12955 493 aa18.35■□□□□ 0.53
CCDC47-202ENST00000403162 TEAD1P28347 426 aa18.35■□□□□ 0.53
CCDC47-202ENST00000403162 CAPZA2P47755 286 aa18.35■□□□□ 0.53
CCDC47-202ENST00000403162 SRP9P49458 86 aaKnown RBP18.35■□□□□ 0.53
CCDC47-202ENST00000403162 MMP15P51511 669 aa18.35■□□□□ 0.53
CCDC47-202ENST00000403162 KLHL12Q53G59 568 aa18.35■□□□□ 0.53
CCDC47-202ENST00000403162 LYPD4Q6UWN0 246 aa18.35■□□□□ 0.53
CCDC47-202ENST00000403162 PTP4A1Q93096 173 aa18.35■□□□□ 0.53
CCDC47-202ENST00000403162 HGDQ93099 445 aa18.35■□□□□ 0.53
CCDC47-202ENST00000403162 YIPF5Q969M3 257 aa18.35■□□□□ 0.53
CCDC47-202ENST00000403162 SHDQ96IW2 340 aa18.35■□□□□ 0.53
CCDC47-202ENST00000403162 PGLYRP3Q96LB9 341 aa18.35■□□□□ 0.53
CCDC47-202ENST00000403162 TEAD3Q99594 435 aa18.35■□□□□ 0.53
CCDC47-202ENST00000403162 TIMM29Q9BSF4 260 aa18.35■□□□□ 0.53
CCDC47-202ENST00000403162 ENKD1Q9H0I2 346 aa18.35■□□□□ 0.53
CCDC47-202ENST00000403162 WDR26Q9H7D7 661 aa18.35■□□□□ 0.53
CCDC47-202ENST00000403162 MBNL1Q9NR56 388 aaKnown RBP18.35■□□□□ 0.53
CCDC47-202ENST00000403162 PRR23D1E9PI22 279 aaPredicted RBP18.34■□□□□ 0.53
CCDC47-202ENST00000403162 REM1O75628 298 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 UBL3O95164 117 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 RCBTB2O95199 551 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 RAF1P04049 648 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 PRR23D2P0DMB1 279 aaPredicted RBP18.34■□□□□ 0.53
CCDC47-202ENST00000403162 C5AR1P21730 350 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 PEBP1P30086 187 aaKnown RBP18.34■□□□□ 0.53
CCDC47-202ENST00000403162 RAG2P55895 527 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 SLC3A1Q07837 685 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 KRT33BQ14525 404 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 SLC25A35Q3KQZ1 300 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 WDR88Q6ZMY6 472 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 ASPGQ86U10 573 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 TIGD4Q8IY51 512 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 LRRC25Q8N386 305 aaPredicted RBP18.34■□□□□ 0.53
CCDC47-202ENST00000403162 TOMM5Q8N4H5 51 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 ZNF680Q8NEM1 530 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 TMEM239Q8WW34 195 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 ADAMTS14Q8WXS8 1223 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 ERVMER34-1Q9H9K5 563 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 FBRSQ9HAH7 460 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 LMAN1LQ9HAT1 526 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 MMP17Q9ULZ9 603 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 ZSCAN5BA6NJL1 495 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 HYAL3O43820 417 aaPredicted RBP18.34■□□□□ 0.53
CCDC47-202ENST00000403162 LYPD3O95274 346 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 FUT1P19526 365 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 CLDN2P57739 230 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 COL9A2Q14055 689 aaPredicted RBP18.34■□□□□ 0.53
CCDC47-202ENST00000403162 COL28A1Q2UY09 1125 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 DMKNQ6E0U4 476 aaPredicted RBP18.34■□□□□ 0.53
CCDC47-202ENST00000403162 LUZP2Q86TE4 346 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 UBALD2Q8IYN6 164 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 C17orf47Q8NEP4 570 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 PFN4Q8NHR9 129 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 HAVCR2Q8TDQ0 301 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 C4orf36Q96KX1 117 aa18.34■□□□□ 0.53
CCDC47-202ENST00000403162 C7orf50Q9BRJ6 194 aaKnown RBP18.34■□□□□ 0.53
CCDC47-202ENST00000403162 EIF3KQ9UBQ5 218 aaKnown RBP18.34■□□□□ 0.53
CCDC47-202ENST00000403162 CENPVL1A0A0U1RR11 272 aa18.33■□□□□ 0.52
CCDC47-202ENST00000403162 A0A1W2PP55 124 aa18.33■□□□□ 0.52
CCDC47-202ENST00000403162 LATO43561 262 aa18.33■□□□□ 0.52
CCDC47-202ENST00000403162 SBK2P0C263 348 aa18.33■□□□□ 0.52
CCDC47-202ENST00000403162 RAB3BP20337 219 aa18.33■□□□□ 0.52
CCDC47-202ENST00000403162 RPS4Y1P22090 263 aaKnown RBP18.33■□□□□ 0.52
CCDC47-202ENST00000403162 HTR2AP28223 471 aa18.33■□□□□ 0.52
CCDC47-202ENST00000403162 DRD3P35462 400 aa18.33■□□□□ 0.52
CCDC47-202ENST00000403162 STARD6P59095 220 aa18.33■□□□□ 0.52
CCDC47-202ENST00000403162 BTN3A2P78410 334 aa18.33■□□□□ 0.52
CCDC47-202ENST00000403162 PITPNAQ00169 270 aa18.33■□□□□ 0.52
CCDC47-202ENST00000403162 FOXK2Q01167 660 aa18.33■□□□□ 0.52
CCDC47-202ENST00000403162 GARNL3Q5VVW2 1013 aa18.33■□□□□ 0.52
CCDC47-202ENST00000403162 ZNF425Q6IV72 752 aa18.33■□□□□ 0.52
CCDC47-202ENST00000403162 TMEM92Q6UXU6 159 aa18.33■□□□□ 0.52
CCDC47-202ENST00000403162 ZNF687Q8N1G0 1237 aa18.33■□□□□ 0.52
CCDC47-202ENST00000403162 OR2L13Q8N349 312 aa18.33■□□□□ 0.52
CCDC47-202ENST00000403162 OR11H4Q8NGC9 324 aa18.33■□□□□ 0.52
CCDC47-202ENST00000403162 FOXQ1Q9C009 403 aa18.33■□□□□ 0.52
CCDC47-202ENST00000403162 HEXA-AS1Q9H8Q6 139 aa18.33■□□□□ 0.52
CCDC47-202ENST00000403162 ADGRL4Q9HBW9 690 aa18.33■□□□□ 0.52
CCDC47-202ENST00000403162 C20orf141Q9NUB4 165 aa18.33■□□□□ 0.52
CCDC47-202ENST00000403162 KCNK6Q9Y257 313 aa18.33■□□□□ 0.52
CCDC47-202ENST00000403162 TRAV1-2A0A0B4J238 106 aa18.32■□□□□ 0.52
CCDC47-202ENST00000403162 PRG2P13727 222 aa18.32■□□□□ 0.52
CCDC47-202ENST00000403162 SLC2A5P22732 501 aa18.32■□□□□ 0.52
CCDC47-202ENST00000403162 CMPK1P30085 196 aa18.32■□□□□ 0.52
CCDC47-202ENST00000403162 NRG3P56975 720 aa18.32■□□□□ 0.52
CCDC47-202ENST00000403162 ZNF85Q03923 595 aa18.32■□□□□ 0.52
CCDC47-202ENST00000403162 DUSP5Q16690 384 aa18.32■□□□□ 0.52
CCDC47-202ENST00000403162 ACSM3Q53FZ2 586 aa18.32■□□□□ 0.52
CCDC47-202ENST00000403162 TOR2AQ5JU69 321 aa18.32■□□□□ 0.52
CCDC47-202ENST00000403162 TMPRSS11FQ6ZWK6 438 aa18.32■□□□□ 0.52
CCDC47-202ENST00000403162 MS4A15Q8N5U1 240 aa18.32■□□□□ 0.52
CCDC47-202ENST00000403162 GAL3ST3Q96A11 431 aa18.32■□□□□ 0.52
CCDC47-202ENST00000403162 SDF2Q99470 211 aa18.32■□□□□ 0.52
CCDC47-202ENST00000403162 SPHK1Q9NYA1 384 aa18.32■□□□□ 0.52
CCDC47-202ENST00000403162 A0A1B0GVI7 797 aa18.32■□□□□ 0.52
CCDC47-202ENST00000403162 PRR19A6NJB7 356 aa18.32■□□□□ 0.52
CCDC47-202ENST00000403162 BTN3A3O00478 584 aa18.32■□□□□ 0.52
CCDC47-202ENST00000403162 CXCL3P19876 107 aa18.32■□□□□ 0.52
CCDC47-202ENST00000403162 GIFP27352 417 aa18.32■□□□□ 0.52
CCDC47-202ENST00000403162 RPS7P62081 194 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms