RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 TMEM200AQ86VY9 491 aa13.81□□□□□ -0.2
ATG4B-202ENST00000400771 KIF18BQ86Y91 864 aa13.81□□□□□ -0.2
ATG4B-202ENST00000400771 C10orf111Q8N326 155 aa13.81□□□□□ -0.2
ATG4B-202ENST00000400771 LINC01560Q8TB33 94 aa13.81□□□□□ -0.2
ATG4B-202ENST00000400771 DYDC1Q8WWB3 177 aa13.81□□□□□ -0.2
ATG4B-202ENST00000400771 CNOT9Q92600 299 aaKnown RBP13.81□□□□□ -0.2
ATG4B-202ENST00000400771 LRRC46Q96FV0 321 aa13.81□□□□□ -0.2
ATG4B-202ENST00000400771 ITCHQ96J02 903 aa13.81□□□□□ -0.2
ATG4B-202ENST00000400771 EXOSC3Q9NQT5 275 aaKnown RBP13.81□□□□□ -0.2
ATG4B-202ENST00000400771 PAQR5Q9NXK6 330 aaPredicted RBP13.81□□□□□ -0.2
ATG4B-202ENST00000400771 LIPT1Q9Y234 373 aa13.81□□□□□ -0.2
ATG4B-202ENST00000400771 SLC35A3Q9Y2D2 325 aa13.81□□□□□ -0.2
ATG4B-202ENST00000400771 TESMINQ9Y4I5 508 aa13.81□□□□□ -0.2
ATG4B-202ENST00000400771 ZNF469Q96JG9 3925 aaPredicted RBP13.81□□□□□ -0.2
ATG4B-202ENST00000400771 ROS1P08922 2347 aa13.8□□□□□ -0.2
ATG4B-202ENST00000400771 A0A1W2PPR1 153 aa13.8□□□□□ -0.2
ATG4B-202ENST00000400771 TUBAL3A6NHL2 446 aa13.8□□□□□ -0.2
ATG4B-202ENST00000400771 AP3D1O14617 1153 aa13.8□□□□□ -0.2
ATG4B-202ENST00000400771 EDF1O60869 148 aaKnown RBP13.8□□□□□ -0.2
ATG4B-202ENST00000400771 SMNDC1O75940 238 aaKnown RBP eCLIP13.8□□□□□ -0.2
ATG4B-202ENST00000400771 KRT75O95678 551 aa13.8□□□□□ -0.2
ATG4B-202ENST00000400771 BMP2P12643 396 aa13.8□□□□□ -0.2
ATG4B-202ENST00000400771 AGTR1P30556 359 aa13.8□□□□□ -0.2
ATG4B-202ENST00000400771 ATP4BP51164 291 aa13.8□□□□□ -0.2
ATG4B-202ENST00000400771 EEF1A1P68104 462 aaKnown RBP13.8□□□□□ -0.2
ATG4B-202ENST00000400771 DAZAP2Q15038 168 aaPredicted RBP13.8□□□□□ -0.2
ATG4B-202ENST00000400771 SGCBQ16585 318 aa13.8□□□□□ -0.2
ATG4B-202ENST00000400771 EEF1A1P5Q5VTE0 462 aa13.8□□□□□ -0.2
ATG4B-202ENST00000400771 C3orf33Q6P1S2 294 aa13.8□□□□□ -0.2
ATG4B-202ENST00000400771 PLEKHM3Q6ZWE6 761 aa13.8□□□□□ -0.2
ATG4B-202ENST00000400771 GOLGA6L1Q8N7Z2 621 aa13.8□□□□□ -0.2
ATG4B-202ENST00000400771 ABHD3Q8WU67 409 aa13.8□□□□□ -0.2
ATG4B-202ENST00000400771 WDR60Q8WVS4 1066 aa13.8□□□□□ -0.2
ATG4B-202ENST00000400771 GMPPAQ96IJ6 420 aaPredicted RBP13.8□□□□□ -0.2
ATG4B-202ENST00000400771 CCDC106Q9BWC9 280 aa13.8□□□□□ -0.2
ATG4B-202ENST00000400771 RMND5AQ9H871 391 aa13.8□□□□□ -0.2
ATG4B-202ENST00000400771 RASSF1Q9NS23 344 aa13.8□□□□□ -0.2
ATG4B-202ENST00000400771 ACER3Q9NUN7 267 aa13.8□□□□□ -0.2
ATG4B-202ENST00000400771 SLAMF8Q9P0V8 285 aa13.8□□□□□ -0.2
ATG4B-202ENST00000400771 STOML1Q9UBI4 398 aa13.8□□□□□ -0.2
ATG4B-202ENST00000400771 ING1Q9UK53 422 aaPredicted RBP13.8□□□□□ -0.2
ATG4B-202ENST00000400771 MCTS1Q9ULC4 181 aaKnown RBP13.8□□□□□ -0.2
ATG4B-202ENST00000400771 CHST2Q9Y4C5 530 aa13.8□□□□□ -0.2
ATG4B-202ENST00000400771 PCDHB14Q9Y5E9 798 aa13.8□□□□□ -0.2
ATG4B-202ENST00000400771 A0A096LPI6 279 aa13.79□□□□□ -0.2
ATG4B-202ENST00000400771 A0A1W2PNR3 127 aa13.79□□□□□ -0.2
ATG4B-202ENST00000400771 NR5A2O00482 541 aa13.79□□□□□ -0.2
ATG4B-202ENST00000400771 SIAH2O43255 324 aa13.79□□□□□ -0.2
ATG4B-202ENST00000400771 CYP7B1O75881 506 aa13.79□□□□□ -0.2
ATG4B-202ENST00000400771 BCHEP06276 602 aa13.79□□□□□ -0.2
ATG4B-202ENST00000400771 NUDT7P0C024 238 aa13.79□□□□□ -0.2
ATG4B-202ENST00000400771 TFPTP0C1Z6 253 aa13.79□□□□□ -0.2
ATG4B-202ENST00000400771 PGCP20142 388 aa13.79□□□□□ -0.2
ATG4B-202ENST00000400771 CD79BP40259 229 aa13.79□□□□□ -0.2
ATG4B-202ENST00000400771 ANXA11P50995 505 aaKnown RBP13.79□□□□□ -0.2
ATG4B-202ENST00000400771 DSTNP60981 165 aa13.79□□□□□ -0.2
ATG4B-202ENST00000400771 STX1BP61266 288 aa13.79□□□□□ -0.2
ATG4B-202ENST00000400771 KCNJ10P78508 379 aa13.79□□□□□ -0.2
ATG4B-202ENST00000400771 FAM27E3Q08E93 113 aa13.79□□□□□ -0.2
ATG4B-202ENST00000400771 TESK1Q15569 626 aa13.79□□□□□ -0.2
ATG4B-202ENST00000400771 TMEM176BQ3YBM2 270 aaPredicted RBP13.79□□□□□ -0.2
ATG4B-202ENST00000400771 RPS26P11Q5JNZ5 115 aaPredicted RBP13.79□□□□□ -0.2
ATG4B-202ENST00000400771 PAGE3Q5JUK9 113 aa13.79□□□□□ -0.2
ATG4B-202ENST00000400771 C6orf10Q5SRN2 563 aa13.79□□□□□ -0.2
ATG4B-202ENST00000400771 MRPL2Q5T653 305 aaKnown RBP13.79□□□□□ -0.2
ATG4B-202ENST00000400771 PPP4R4Q6NUP7 873 aa13.79□□□□□ -0.2
ATG4B-202ENST00000400771 ZNF836Q6ZNA1 936 aa13.79□□□□□ -0.2
ATG4B-202ENST00000400771 CMIPQ8IY22 773 aa13.79□□□□□ -0.2
ATG4B-202ENST00000400771 OR6K3Q8NGY3 331 aa13.79□□□□□ -0.2
ATG4B-202ENST00000400771 ROBO4Q8WZ75 1007 aa13.79□□□□□ -0.2
ATG4B-202ENST00000400771 OSTF1Q92882 214 aa13.79□□□□□ -0.2
ATG4B-202ENST00000400771 CPNE4Q96A23 557 aaPredicted RBP13.79□□□□□ -0.2
ATG4B-202ENST00000400771 THOC1Q96FV9 657 aaKnown RBP13.79□□□□□ -0.2
ATG4B-202ENST00000400771 RSPO3Q9BXY4 272 aaPredicted RBP13.79□□□□□ -0.2
ATG4B-202ENST00000400771 IKZF5Q9H5V7 419 aa13.79□□□□□ -0.2
ATG4B-202ENST00000400771 P2RX2Q9UBL9 471 aa13.79□□□□□ -0.2
ATG4B-202ENST00000400771 FLNAP21333 2647 aaKnown RBP13.79□□□□□ -0.2
ATG4B-202ENST00000400771 SH3D21A4FU49 640 aa13.78□□□□□ -0.2
ATG4B-202ENST00000400771 SMAD9O15198 467 aaKnown RBP13.78□□□□□ -0.2
ATG4B-202ENST00000400771 NR2F1P10589 423 aa13.78□□□□□ -0.2
ATG4B-202ENST00000400771 EPXP11678 715 aa13.78□□□□□ -0.2
ATG4B-202ENST00000400771 SQLEQ14534 574 aa13.78□□□□□ -0.2
ATG4B-202ENST00000400771 RGNQ15493 299 aa13.78□□□□□ -0.2
ATG4B-202ENST00000400771 C22orf34Q6ZV56 151 aa13.78□□□□□ -0.2
ATG4B-202ENST00000400771 ZNF610Q8N9Z0 462 aa13.78□□□□□ -0.2
ATG4B-202ENST00000400771 ATP6V1C2Q8NEY4 427 aa13.78□□□□□ -0.2
ATG4B-202ENST00000400771 SLC38A5Q8WUX1 472 aa13.78□□□□□ -0.2
ATG4B-202ENST00000400771 SPDL1Q96EA4 605 aa13.78□□□□□ -0.2
ATG4B-202ENST00000400771 TMEM19Q96HH6 336 aa13.78□□□□□ -0.2
ATG4B-202ENST00000400771 CLEC4MQ9H2X3 399 aaPredicted RBP13.78□□□□□ -0.2
ATG4B-202ENST00000400771 LIME1Q9H400 295 aa13.78□□□□□ -0.2
ATG4B-202ENST00000400771 CTPS2Q9NRF8 586 aa13.78□□□□□ -0.2
ATG4B-202ENST00000400771 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.78□□□□□ -0.2
ATG4B-202ENST00000400771 CCDC167Q9P0B6 97 aa13.78□□□□□ -0.2
ATG4B-202ENST00000400771 VAPAQ9P0L0 249 aa13.78□□□□□ -0.2
ATG4B-202ENST00000400771 PROCRQ9UNN8 238 aa13.78□□□□□ -0.2
ATG4B-202ENST00000400771 GMEB1Q9Y692 573 aa13.78□□□□□ -0.2
ATG4B-202ENST00000400771 IGHV3-15A0A0B4J1V0 119 aa13.77□□□□□ -0.21
ATG4B-202ENST00000400771 CDHR4A6H8M9 788 aa13.77□□□□□ -0.21
ATG4B-202ENST00000400771 GJE1A6NN92 205 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms