RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 ZNF770Q6IQ21 691 aaPredicted RBP6.24□□□□□ -1.41
USP16-203ENST00000399975 PPP4R4Q6NUP7 873 aa6.24□□□□□ -1.41
USP16-203ENST00000399975 ULK3Q6PHR2 472 aa6.24□□□□□ -1.41
USP16-203ENST00000399975 CD300LDQ6UXZ3 194 aa6.24□□□□□ -1.41
USP16-203ENST00000399975 Q6ZNX1 250 aa6.24□□□□□ -1.41
USP16-203ENST00000399975 GDF7Q7Z4P5 450 aa6.24□□□□□ -1.41
USP16-203ENST00000399975 PLCZ1Q86YW0 608 aa6.24□□□□□ -1.41
USP16-203ENST00000399975 WDSUB1Q8N9V3 476 aa6.24□□□□□ -1.41
USP16-203ENST00000399975 FDCSPQ8NFU4 85 aa6.24□□□□□ -1.41
USP16-203ENST00000399975 VANGL1Q8TAA9 524 aaPredicted RBP6.24□□□□□ -1.41
USP16-203ENST00000399975 FNDC8Q8TC99 324 aa6.24□□□□□ -1.41
USP16-203ENST00000399975 SLC38A4Q969I6 547 aa6.24□□□□□ -1.41
USP16-203ENST00000399975 SLC41A3Q96GZ6 507 aa6.24□□□□□ -1.41
USP16-203ENST00000399975 PRSS27Q9BQR3 290 aa6.24□□□□□ -1.41
USP16-203ENST00000399975 REEP1Q9H902 201 aa6.24□□□□□ -1.41
USP16-203ENST00000399975 NMNAT1Q9HAN9 279 aaPredicted RBP6.24□□□□□ -1.41
USP16-203ENST00000399975 QPCTLQ9NXS2 382 aa6.24□□□□□ -1.41
USP16-203ENST00000399975 PPP4R1LQ9P1A2 415 aa6.24□□□□□ -1.41
USP16-203ENST00000399975 LRFN1Q9P244 771 aa6.24□□□□□ -1.41
USP16-203ENST00000399975 CARD8Q9Y2G2 431 aa6.24□□□□□ -1.41
USP16-203ENST00000399975 KLF13Q9Y2Y9 288 aaPredicted RBP6.24□□□□□ -1.41
USP16-203ENST00000399975 AP4B1Q9Y6B7 739 aa6.24□□□□□ -1.41
USP16-203ENST00000399975 V9GYQ6 96 aa6.24□□□□□ -1.41
USP16-203ENST00000399975 DMXL1Q9Y485 3027 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 SH3PXD2BA1X283 911 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 E9PQ18 207 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 J3KTA2 159 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 GLSO94925 669 aaPredicted RBP6.23□□□□□ -1.41
USP16-203ENST00000399975 GADD45GO95257 159 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 RASAL1O95294 804 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 SP1P08047 785 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 ZNF17P17021 662 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 RRM2P31350 389 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 SLC1A3P43003 542 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 MERTKQ12866 999 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 MICAQ29983 383 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 COL28A1Q2UY09 1125 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 TIGD3Q6B0B8 471 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 SLC25A25Q6KCM7 469 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 RPUSD3Q6P087 351 aaKnown RBP6.23□□□□□ -1.41
USP16-203ENST00000399975 FAHD1Q6P587 224 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 C5orf46Q6UWT4 87 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 DEF8Q6ZN54 512 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 PLEKHM3Q6ZWE6 761 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 HMGN2P46Q86SG4 172 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 ATG4DQ86TL0 474 aaPredicted RBP6.23□□□□□ -1.41
USP16-203ENST00000399975 ZNF420Q8TAQ5 688 aaPredicted RBP6.23□□□□□ -1.41
USP16-203ENST00000399975 DUSP19Q8WTR2 217 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 TMEM234Q8WY98 164 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 ZBTB8AQ96BR9 441 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 RDH12Q96NR8 316 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 TMEM43Q9BTV4 400 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 FNDC11Q9BVV2 318 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 DGCR6LQ9BY27 220 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 ANKRD60Q9BZ19 345 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 OR2B2Q9GZK3 357 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 FAIMQ9NVQ4 179 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 KLRF1Q9NZS2 232 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 A0A087WUJ7 227 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 A0A1B0GWA3 101 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 B4DXG7 233 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 TNFRSF11BO00300 401 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 SCO2O43819 266 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 CBR3O75828 277 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 GKN3PP0CG01 181 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 TNFSF10P50591 281 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 CCL11P51671 97 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 CTBP2P56545 445 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 DSCR4P56555 118 aaPredicted RBP6.23□□□□□ -1.41
USP16-203ENST00000399975 NUP107P57740 925 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 TAS2R41P59536 307 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 SPIBQ01892 262 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 FOXO1Q12778 655 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 INAQ16352 499 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 TBR1Q16650 682 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 CBLN3Q6UW01 205 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 TMEM179BQ7Z7N9 219 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 AMIGO2Q86SJ2 522 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 EPHX4Q8IUS5 362 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 LIPHQ8WWY8 451 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 ACOT11Q8WXI4 607 aaPredicted RBP6.23□□□□□ -1.41
USP16-203ENST00000399975 TM9SF4Q92544 642 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 C3orf49Q96BT1 292 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 ITPKCQ96DU7 683 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 C1GALT1C1Q96EU7 318 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 MRGPRX4Q96LA9 322 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 SIGLEC12Q96PQ1 595 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 YTHDF1Q9BYJ9 559 aaKnown RBP6.23□□□□□ -1.41
USP16-203ENST00000399975 ADNPQ9H2P0 1102 aa6.23□□□□□ -1.41
USP16-203ENST00000399975 MED19A0JLT2 244 aaPredicted RBP6.22□□□□□ -1.41
USP16-203ENST00000399975 LRRC3CA6NJW4 275 aa6.22□□□□□ -1.41
USP16-203ENST00000399975 LINC01387J3KSC0 135 aa6.22□□□□□ -1.41
USP16-203ENST00000399975 KLF4O43474 513 aa6.22□□□□□ -1.41
USP16-203ENST00000399975 FRS3O43559 492 aa6.22□□□□□ -1.41
USP16-203ENST00000399975 HCRTR2O43614 444 aa6.22□□□□□ -1.41
USP16-203ENST00000399975 CD46P15529 392 aa6.22□□□□□ -1.41
USP16-203ENST00000399975 MST1P26927 711 aa6.22□□□□□ -1.41
USP16-203ENST00000399975 ELK4P28324 431 aa6.22□□□□□ -1.41
USP16-203ENST00000399975 SRD5A2P31213 254 aa6.22□□□□□ -1.41
USP16-203ENST00000399975 APOBEC1P41238 236 aaKnown RBP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms