RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 TUBA1AQ71U36 451 aa10.3□□□□□ -0.76
CACNA1C-216ENST00000399638 Q7L0L9 218 aa10.3□□□□□ -0.76
CACNA1C-216ENST00000399638 MKXQ8IYA7 352 aa10.3□□□□□ -0.76
CACNA1C-216ENST00000399638 ADOQ96SZ5 270 aa10.3□□□□□ -0.76
CACNA1C-216ENST00000399638 CNTD2Q9H8S5 307 aa10.3□□□□□ -0.76
CACNA1C-216ENST00000399638 DNMT3BQ9UBC3 853 aaKnown RBP10.3□□□□□ -0.76
CACNA1C-216ENST00000399638 NXT1Q9UKK6 140 aaKnown RBP10.3□□□□□ -0.76
CACNA1C-216ENST00000399638 TMEM14AQ9Y6G1 99 aa10.3□□□□□ -0.76
CACNA1C-216ENST00000399638 A6NIZ1 184 aa10.3□□□□□ -0.76
CACNA1C-216ENST00000399638 DPM1O60762 260 aa10.3□□□□□ -0.76
CACNA1C-216ENST00000399638 CSO75390 466 aaKnown RBP10.3□□□□□ -0.76
CACNA1C-216ENST00000399638 C8BP07358 591 aa10.3□□□□□ -0.76
CACNA1C-216ENST00000399638 FAM163BP0C2L3 166 aa10.3□□□□□ -0.76
CACNA1C-216ENST00000399638 RAP1BP61224 184 aa10.3□□□□□ -0.76
CACNA1C-216ENST00000399638 RAP1AP62834 184 aa10.3□□□□□ -0.76
CACNA1C-216ENST00000399638 MORN1Q5T089 497 aa10.3□□□□□ -0.76
CACNA1C-216ENST00000399638 FAM182AQ5T1J6 154 aa10.3□□□□□ -0.76
CACNA1C-216ENST00000399638 TMPRSS11FQ6ZWK6 438 aa10.3□□□□□ -0.76
CACNA1C-216ENST00000399638 DHRS4Q9BTZ2 278 aa10.3□□□□□ -0.76
CACNA1C-216ENST00000399638 KLHL9Q9P2J3 617 aa10.3□□□□□ -0.76
CACNA1C-216ENST00000399638 GNG12Q9UBI6 72 aa10.3□□□□□ -0.76
CACNA1C-216ENST00000399638 H3BNC9 293 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 PTBP3O95758 552 aaKnown RBP10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 COX6B1P14854 86 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 TMEM176BQ3YBM2 270 aaPredicted RBP10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 TMPRSS12Q86WS5 348 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 OR52R1Q8NGF1 315 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 CNOT9Q92600 299 aaKnown RBP10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 SLC45A3Q96JT2 553 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 MTCH1Q9NZJ7 389 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 LHX6Q9UPM6 363 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 MEIS3P1A6NDR6 274 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 ABCD4O14678 606 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 SNNO75324 88 aaPredicted RBP10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 RPS26P62854 115 aaKnown RBP10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 SQSTM1Q13501 440 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 LINC00299Q6ZSB3 139 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 USP43Q70EL4 1123 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 MINDY1Q8N5J2 469 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 LMO3Q8TAP4 145 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 SLC22A4Q9H015 551 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 A8MT66 165 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 SERPINA5P05154 406 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 PET100P0DJ07 73 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 ID4P47928 161 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 SPINT3P49223 89 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 EFNA3P52797 238 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 CTBSQ01459 385 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 OLIG2Q13516 323 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 EXOSC2Q13868 293 aaKnown RBP10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 DAG1Q14118 895 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 RAB35Q15286 201 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 PNCKQ6P2M8 343 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 PTRH1Q86Y79 214 aaKnown RBP10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 OR7G2Q8NG99 324 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 OR5H2Q8NGV7 314 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 FCAMRQ8WWV6 532 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 PSMF1Q92530 271 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 CGREF1Q99674 301 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 ST6GALNAC5Q9BVH7 336 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 P4HTMQ9NXG6 502 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 UBQLN2Q9UHD9 624 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 TRAPPC2LQ9UL33 140 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 MYH8P13535 1937 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 NPIPA5A0A0B4J1W7 369 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 SOBPA7XYQ1 873 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 TSPAN12O95859 305 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 LIPCP11150 499 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 GSK3BP49841 420 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 NUDT6P53370 316 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 TAS2R38P59533 333 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 RACK1P63244 317 aaKnown RBP10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 SLC35A2P78381 396 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 PLEKHN1Q494U1 663 aaPredicted RBP10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 DESI1Q6ICB0 168 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 TAS1R1Q7RTX1 841 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 ISOC1Q96CN7 298 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 SYT4Q9H2B2 425 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 RHBDD3Q9Y3P4 386 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 TUSC2O75896 110 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 BEST1O76090 585 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 COL14A1Q05707 1796 aaKnown RBP10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 ADAM15Q13444 863 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 KIR2DS3Q14952 304 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 SLC36A2Q495M3 483 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 RNASE10Q5GAN6 216 aaKnown RBP10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 CCDC71LQ8N9Z2 235 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 ACOT11Q8WXI4 607 aaPredicted RBP10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 OR4K3Q96R72 315 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 PSD2Q9BQI7 771 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 TAS2R10Q9NYW0 307 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 GJD2Q9UKL4 321 aa10.29□□□□□ -0.76
CACNA1C-216ENST00000399638 TUBGCP6Q96RT7 1819 aa10.28□□□□□ -0.76
CACNA1C-216ENST00000399638 CAMTA1Q9Y6Y1 1673 aa10.28□□□□□ -0.76
CACNA1C-216ENST00000399638 PBX2P40425 430 aa10.28□□□□□ -0.76
CACNA1C-216ENST00000399638 CAV2P51636 162 aa10.28□□□□□ -0.76
CACNA1C-216ENST00000399638 PPP2CBP62714 309 aa10.28□□□□□ -0.76
CACNA1C-216ENST00000399638 ALKBH6Q3KRA9 238 aa10.28□□□□□ -0.76
CACNA1C-216ENST00000399638 CES4AQ5XG92 561 aa10.28□□□□□ -0.76
CACNA1C-216ENST00000399638 EIF5AL1Q6IS14 154 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms