RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 ACTC1P68032 377 aa12.12□□□□□ -0.47
PRAME-201ENST00000398741 ACTA1P68133 377 aa12.12□□□□□ -0.47
PRAME-201ENST00000398741 EXOSC7Q15024 291 aaKnown RBP12.12□□□□□ -0.47
PRAME-201ENST00000398741 ITPRIPL2Q3MIP1 535 aa12.12□□□□□ -0.47
PRAME-201ENST00000398741 ACSM3Q53FZ2 586 aa12.12□□□□□ -0.47
PRAME-201ENST00000398741 ZCCHC12Q6PEW1 402 aa12.12□□□□□ -0.47
PRAME-201ENST00000398741 ZNF613Q6PF04 617 aa12.12□□□□□ -0.47
PRAME-201ENST00000398741 RPTNQ6XPR3 784 aa12.12□□□□□ -0.47
PRAME-201ENST00000398741 C17orf47Q8NEP4 570 aa12.12□□□□□ -0.47
PRAME-201ENST00000398741 CCL4L1Q8NHW4 92 aa12.12□□□□□ -0.47
PRAME-201ENST00000398741 PHF21AQ96BD5 680 aa12.12□□□□□ -0.47
PRAME-201ENST00000398741 ARSGQ96EG1 525 aa12.12□□□□□ -0.47
PRAME-201ENST00000398741 NECTIN4Q96NY8 510 aa12.12□□□□□ -0.47
PRAME-201ENST00000398741 MED28Q9H204 178 aa12.12□□□□□ -0.47
PRAME-201ENST00000398741 CAPN10Q9HC96 672 aa12.12□□□□□ -0.47
PRAME-201ENST00000398741 LYRM4Q9HD34 91 aa12.12□□□□□ -0.47
PRAME-201ENST00000398741 USP36Q9P275 1121 aaKnown RBP12.12□□□□□ -0.47
PRAME-201ENST00000398741 ZMIZ1Q9ULJ6 1067 aa12.12□□□□□ -0.47
PRAME-201ENST00000398741 BAIAP2Q9UQB8 552 aa12.12□□□□□ -0.47
PRAME-201ENST00000398741 YBX2Q9Y2T7 364 aaKnown RBP12.12□□□□□ -0.47
PRAME-201ENST00000398741 HSPB11Q9Y547 144 aa12.12□□□□□ -0.47
PRAME-201ENST00000398741 LOC105369274A0A096LPK9 316 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 FZD7O75084 574 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 GYPBP06028 91 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 RAB3BP20337 219 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 PYCR1P32322 319 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 KIAA1024LP59773 190 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 ZNF85Q03923 595 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 POU4F2Q12837 409 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 NTRK2Q16620 822 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 PLA1AQ53H76 456 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 BCL2L15Q5TBC7 163 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 HACD4Q5VWC8 232 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 FCRL6Q6DN72 434 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 SDE2Q6IQ49 451 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 OR4N4Q8N0Y3 316 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 MS4A15Q8N5U1 240 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 FLVCR1-AS1Q8TAF5 88 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 TSACCQ96A04 125 aaPredicted RBP12.11□□□□□ -0.47
PRAME-201ENST00000398741 ZFYVE21Q9BQ24 234 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 DPAGT1Q9H3H5 408 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 ERVMER34-1Q9H9K5 563 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 MEPEQ9NQ76 525 aaPredicted RBP12.11□□□□□ -0.47
PRAME-201ENST00000398741 ACTR10Q9NZ32 417 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 STMN3Q9NZ72 180 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 A0A0A6YYJ9 748 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 A0A1W2PRG6 482 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 OR6C74A6NCV1 312 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 TNFSF14O43557 240 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 CHP2O43745 196 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 BRINP1O60477 761 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 RASGRP1O95267 797 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 GPR75O95800 540 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 SERPINA3P01011 423 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 TFPIP10646 304 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 IL9P15248 144 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 SLC6A6P31641 620 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 NRG3P56975 720 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 NFATC4Q14934 902 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 SLC25A35Q3KQZ1 300 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 EXOSC6Q5RKV6 272 aaKnown RBP12.11□□□□□ -0.47
PRAME-201ENST00000398741 ARHGAP11AQ6P4F7 1023 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 LRRC17Q8N6Y2 441 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 OR5J2Q8NH18 312 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 SLC2A12Q8TD20 617 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 SMAP2Q8WU79 429 aaPredicted RBP12.11□□□□□ -0.47
PRAME-201ENST00000398741 HYLS1Q96M11 299 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 WDR92Q96MX6 357 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 SMAD5Q99717 465 aaKnown RBP12.11□□□□□ -0.47
PRAME-201ENST00000398741 IRF2BPLQ9H1B7 796 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 TEKT2Q9UIF3 430 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 CA5BQ9Y2D0 317 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 MRPS2Q9Y399 296 aaKnown RBP12.11□□□□□ -0.47
PRAME-201ENST00000398741 TRANK1O15050 2925 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 REV3LO60673 3130 aa12.11□□□□□ -0.47
PRAME-201ENST00000398741 TRAV6A0A075B6T7 132 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 A0A0G2JK05 382 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 GXYLT2A0PJZ3 443 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 NOTOA8MTQ0 251 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 AKR7A2O43488 359 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 RFPL3O75679 317 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 SOX30O94993 753 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 SLC2A5P22732 501 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 NTSR1P30989 418 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 KIR2DL1P43626 348 aaPredicted RBP12.1□□□□□ -0.47
PRAME-201ENST00000398741 PRICKLE4Q2TBC4 344 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 FAAH2Q6GMR7 532 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 RTL4Q6ZR62 310 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 PRSS41Q7RTY9 318 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 PXKQ7Z7A4 578 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 ZNF655Q8N720 491 aaPredicted RBP12.1□□□□□ -0.47
PRAME-201ENST00000398741 FAM98AQ8NCA5 519 aaKnown RBP12.1□□□□□ -0.47
PRAME-201ENST00000398741 OR7G1Q8NGA0 311 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 GHSRQ92847 366 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 PMM1Q92871 262 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 SNAPC3Q92966 411 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 PGLYRP3Q96LB9 341 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 TNFRSF13CQ96RJ3 184 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 TTTY10Q9BZA0 68 aa12.1□□□□□ -0.47
PRAME-201ENST00000398741 TMEM168Q9H0V1 697 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms