RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 TNFSF12O43508 249 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 CACNG3O60359 315 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 POU3F2P20265 443 aaPredicted RBP10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 AFF3P51826 1226 aaKnown RBP10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 RAB11BQ15907 218 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 ENTPD8Q5MY95 495 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 PAPD4Q6PIY7 484 aaKnown RBP10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 Q6ZSR9 355 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 IL17RDQ8NFM7 739 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 ZNF420Q8TAQ5 688 aaPredicted RBP10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 FNDC8Q8TC99 324 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 ACOT11Q8WXI4 607 aaPredicted RBP10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 MRPL38Q96DV4 380 aaKnown RBP10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 UBXN10Q96LJ8 280 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 KLHL15Q96M94 604 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 CHRDQ9H2X0 955 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 MBNL1Q9NR56 388 aaKnown RBP10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 UBQLN4Q9NRR5 601 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 HHLA1C9JL84 531 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 PCGF2P35227 344 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 MMP12P39900 470 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 COL28A1Q2UY09 1125 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 SH2D5Q6ZV89 423 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 SLC35D2Q76EJ3 337 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 RAB11FIP2Q7L804 512 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 SPAG16Q8N0X2 631 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 OR4F15Q8NGB8 312 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 IL1F10Q8WWZ1 152 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 ST6GALNAC5Q9BVH7 336 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 STUB1Q9UNE7 303 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 M0R233 179 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 ABLIM3O94929 683 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 PENKP01210 267 aaPredicted RBP10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 CDK4P11802 303 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 EDN3P14138 238 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 TUBG1P23258 451 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 CTGFP29279 349 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 CSNK1A1P48729 337 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 TPMTP51580 245 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 PRPS1P60891 318 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 DEFB123Q8N688 67 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 B3GNT7Q8NFL0 401 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 SLC37A2Q8TED4 501 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 OR1E3Q8WZA6 343 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 RRNAD1Q96FB5 475 aaKnown RBP10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 ANKRD60Q9BZ19 345 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 GPN2Q9H9Y4 310 aaPredicted RBP10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 MOV10Q9HCE1 1003 aaKnown RBP10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 TMEM181Q9P2C4 612 aa10.78□□□□□ -0.68
PCDHGA8-201ENST00000398604 ANKRD28O15084 1053 aa10.77□□□□□ -0.68
PCDHGA8-201ENST00000398604 TCN2P20062 427 aa10.77□□□□□ -0.68
PCDHGA8-201ENST00000398604 IL32P24001 234 aa10.77□□□□□ -0.68
PCDHGA8-201ENST00000398604 SLC5A2P31639 672 aa10.77□□□□□ -0.68
PCDHGA8-201ENST00000398604 NR4A2P43354 598 aa10.77□□□□□ -0.68
PCDHGA8-201ENST00000398604 CSNK2A1P68400 391 aaPredicted RBP10.77□□□□□ -0.68
PCDHGA8-201ENST00000398604 GNMTQ14749 295 aa10.77□□□□□ -0.68
PCDHGA8-201ENST00000398604 MLF2Q15773 248 aaPredicted RBP10.77□□□□□ -0.68
PCDHGA8-201ENST00000398604 C9orf50Q5SZB4 431 aa10.77□□□□□ -0.68
PCDHGA8-201ENST00000398604 DPY19L4Q7Z388 723 aa10.77□□□□□ -0.68
PCDHGA8-201ENST00000398604 CLEC14AQ86T13 490 aa10.77□□□□□ -0.68
PCDHGA8-201ENST00000398604 MMP21Q8N119 569 aa10.77□□□□□ -0.68
PCDHGA8-201ENST00000398604 CSNK2A3Q8NEV1 391 aa10.77□□□□□ -0.68
PCDHGA8-201ENST00000398604 OR5T1Q8NG75 326 aa10.77□□□□□ -0.68
PCDHGA8-201ENST00000398604 CRISPLD2Q9H0B8 497 aa10.77□□□□□ -0.68
PCDHGA8-201ENST00000398604 C6orf106Q9H6K1 298 aaPredicted RBP10.77□□□□□ -0.68
PCDHGA8-201ENST00000398604 MED20Q9H944 212 aa10.77□□□□□ -0.68
PCDHGA8-201ENST00000398604 INIPQ9NRY2 104 aa10.77□□□□□ -0.68
PCDHGA8-201ENST00000398604 FKBP14Q9NWM8 211 aa10.77□□□□□ -0.68
PCDHGA8-201ENST00000398604 ROS1P08922 2347 aa10.77□□□□□ -0.68
PCDHGA8-201ENST00000398604 LOC102723532A0A0G2JNH3 316 aa10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 FTCDNL1E5RQL4 147 aa10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 PRKNO60260 465 aaPredicted RBP10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 GIPRP48546 466 aa10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 CSNK1DP48730 415 aa10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 NKX2-5P52952 324 aaPredicted RBP10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 WNT4P56705 351 aa10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 SIRPAP78324 504 aa10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 POU4F2Q12837 409 aa10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 OR2G6Q5TZ20 316 aa10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 KCTD11Q693B1 232 aa10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 VASNQ6EMK4 673 aa10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 KDM8Q8N371 416 aa10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 ZC3H10Q96K80 434 aaKnown RBP10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 ZNF597Q96LX8 424 aa10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 ASB16Q96NS5 453 aa10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 NOTCH3Q9UM47 2321 aa10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 ISPDA4D126 451 aa10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 FBP2O00757 339 aa10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 SRPX2O60687 465 aaPredicted RBP10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 RGS9O75916 674 aaPredicted RBP10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 SERPINA5P05154 406 aa10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 ZNF44P15621 663 aa10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 ABOP16442 354 aa10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 NFATC3Q12968 1075 aa10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 OR1Q1Q15612 314 aa10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 SLCO4C1Q6ZQN7 724 aa10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 ADIPOR2Q86V24 386 aa10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 LRRC18Q8N456 261 aa10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 TEX19Q8NA77 164 aa10.77□□□□□ -0.69
PCDHGA8-201ENST00000398604 SCGB1C1Q8TD33 95 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms