RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 TRAV27A0A087WT01 109 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 A0A0J9YY10 115 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 RFPL3O75679 317 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 SEMA4FO95754 770 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 TNFP01375 233 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 SAGP10523 405 aaPredicted RBP16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 SLC16A1P53985 500 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 YPEL5P62699 121 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 CSTF1Q05048 431 aaKnown RBP16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 GPR50Q13585 617 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 PYDC2Q56P42 97 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 ATP6V1C2Q8NEY4 427 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 OR9A4Q8NGU2 314 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 OR51A7Q8NH64 312 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 BRIX1Q8TDN6 353 aaKnown RBP16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 RSC1A1Q92681 617 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 ANKRD9Q96BM1 317 aaPredicted RBP16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 BPIFA2Q96DR5 249 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 POT1Q9NUX5 634 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 HYAL3O43820 417 aaPredicted RBP16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 REM1O75628 298 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 DRD1P21728 446 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 CFL1P23528 166 aaKnown RBP16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 EOGTQ5NDL2 527 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 NIPAL3Q6P499 406 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 XKRXQ6PP77 449 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 RNF44Q7L0R7 432 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 RAB43Q86YS6 212 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 TMEM99Q8N816 258 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 FAM181AQ8N9Y4 354 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 OR52R1Q8NGF1 315 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 GPBAR1Q8TDU6 330 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 CNOT9Q92600 299 aaKnown RBP16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 PTCHD1Q96NR3 888 aa16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 MEPEQ9NQ76 525 aaPredicted RBP16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 USP36Q9P275 1121 aaKnown RBP16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 NUFIP1Q9UHK0 495 aaKnown RBP16.97■□□□□ 0.31
CHRFAM7A-202ENST00000397827 LAMA1P25391 3075 aa16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 HMX3A6NHT5 357 aa16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 CHST10O43529 356 aa16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 BRINP1O60477 761 aa16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 ADAM11O75078 769 aa16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 HLA-DPB1P04440 258 aa16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 UBE2IP63279 158 aaKnown RBP16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 MRPS21P82921 87 aaKnown RBP16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 SCN1BQ07699 218 aa16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 TAF8Q7Z7C8 310 aa16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 ZNF655Q8N720 491 aaPredicted RBP16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 OR4N2Q8NGD1 307 aa16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 OR52N1Q8NH53 320 aa16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 SMAP2Q8WU79 429 aaPredicted RBP16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 AP3S1Q92572 193 aa16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 STACQ99469 402 aa16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 IFT27Q9BW83 186 aa16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 ENTPD2Q9Y5L3 495 aa16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 SIRT4Q9Y6E7 314 aaPredicted RBP16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 LRP4O75096 1905 aa16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 J3QRE1 110 aa16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 HPGDSO60760 199 aa16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 CBX7O95931 251 aa16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 ATXN8OSP0DMR3 200 aa16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 ST6GAL1P15907 406 aa16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 APEX1P27695 318 aaKnown RBP16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 CD83Q01151 205 aa16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 OR51V1Q9H2C8 321 aa16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 ATPIF1Q9UII2 106 aa16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 CD207Q9UJ71 328 aa16.96■□□□□ 0.31
CHRFAM7A-202ENST00000397827 A8MUA0 341 aa16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 CDC123O75794 336 aaPredicted RBP16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 MRPL3P09001 348 aaKnown RBP16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 CLUP10909 449 aa16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 MAP3K8P41279 467 aa16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 B2MP61769 119 aa16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 RPS7P62081 194 aaKnown RBP16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 PRPF38BQ5VTL8 546 aaKnown RBP16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 TMEM91Q6ZNR0 172 aa16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 MEPCEQ7L2J0 689 aaKnown RBP16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 ACBD7Q8N6N7 88 aa16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 PTP4A1Q93096 173 aa16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 CTHRC1Q96CG8 243 aa16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 NECTIN4Q96NY8 510 aa16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 TIMP4Q99727 224 aa16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 C11orf54Q9H0W9 315 aaPredicted RBP16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 PRDM9Q9NQV7 894 aa16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 GRIP1Q9Y3R0 1128 aa16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 MEIOCA2RUB1 952 aa16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 OR2W5A6NFC9 320 aa16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 OR10H2O60403 315 aa16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 IGHV4-34P06331 123 aa16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 NOS3P29474 1203 aa16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 FOXK2Q01167 660 aa16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 RNF113BQ8IZP6 322 aaKnown RBP16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 CYB561A3Q8NBI2 242 aa16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 SLC37A3Q8NCC5 494 aa16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 DACT3Q96B18 629 aaPredicted RBP16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 ALG8Q9BVK2 526 aa16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 FBXL4Q9UKA2 621 aa16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 SIGLEC7Q9Y286 467 aa16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 SLCO1B1Q9Y6L6 691 aa16.95■□□□□ 0.3
CHRFAM7A-202ENST00000397827 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms