RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 OR5M1Q8NGP8 315 aa13.13□□□□□ -0.31
SEC13-208ENST00000397109 XAGE5Q8WWM1 108 aa13.13□□□□□ -0.31
SEC13-208ENST00000397109 OIT3Q8WWZ8 545 aa13.13□□□□□ -0.31
SEC13-208ENST00000397109 RNASE6Q93091 150 aaKnown RBP13.13□□□□□ -0.31
SEC13-208ENST00000397109 SLC35A5Q9BS91 424 aa13.13□□□□□ -0.31
SEC13-208ENST00000397109 SFXN3Q9BWM7 321 aa13.13□□□□□ -0.31
SEC13-208ENST00000397109 PAIP1Q9H074 479 aaKnown RBP13.13□□□□□ -0.31
SEC13-208ENST00000397109 POLE3Q9NRF9 147 aa13.13□□□□□ -0.31
SEC13-208ENST00000397109 MED17Q9NVC6 651 aa13.13□□□□□ -0.31
SEC13-208ENST00000397109 ACTR3BQ9P1U1 418 aa13.13□□□□□ -0.31
SEC13-208ENST00000397109 KCNN3Q9UGI6 736 aa13.13□□□□□ -0.31
SEC13-208ENST00000397109 APCP25054 2843 aa13.13□□□□□ -0.31
SEC13-208ENST00000397109 NPIPA5A0A0B4J1W7 369 aa13.12□□□□□ -0.31
SEC13-208ENST00000397109 NPIPA7E9PJI5 369 aa13.12□□□□□ -0.31
SEC13-208ENST00000397109 CRHP06850 196 aa13.12□□□□□ -0.31
SEC13-208ENST00000397109 NPIPA8P0DM63 369 aa13.12□□□□□ -0.31
SEC13-208ENST00000397109 OR12D1P0DN82 309 aa13.12□□□□□ -0.31
SEC13-208ENST00000397109 EIF1P41567 113 aaKnown RBP13.12□□□□□ -0.31
SEC13-208ENST00000397109 KHKP50053 298 aa13.12□□□□□ -0.31
SEC13-208ENST00000397109 P2RX1P51575 399 aa13.12□□□□□ -0.31
SEC13-208ENST00000397109 FXNQ16595 210 aa13.12□□□□□ -0.31
SEC13-208ENST00000397109 PLPPR5Q32ZL2 321 aa13.12□□□□□ -0.31
SEC13-208ENST00000397109 HEPHL1Q6MZM0 1159 aa13.12□□□□□ -0.31
SEC13-208ENST00000397109 DLEU7Q6UYE1 221 aa13.12□□□□□ -0.31
SEC13-208ENST00000397109 ZNF621Q6ZSS3 439 aa13.12□□□□□ -0.31
SEC13-208ENST00000397109 DHFR2Q86XF0 187 aa13.12□□□□□ -0.31
SEC13-208ENST00000397109 LRGUKQ96M69 825 aa13.12□□□□□ -0.31
SEC13-208ENST00000397109 ZNF350Q9GZX5 532 aa13.12□□□□□ -0.31
SEC13-208ENST00000397109 PAQR5Q9NXK6 330 aaPredicted RBP13.12□□□□□ -0.31
SEC13-208ENST00000397109 ZNF175Q9Y473 711 aa13.12□□□□□ -0.31
SEC13-208ENST00000397109 ANKHD1Q8IWZ3 2542 aaKnown RBP13.12□□□□□ -0.31
SEC13-208ENST00000397109 TCRBV3S1A0A5B6 114 aa13.11□□□□□ -0.31
SEC13-208ENST00000397109 SLC22A20A6NK97 555 aa13.11□□□□□ -0.31
SEC13-208ENST00000397109 SEC14L5O43304 696 aa13.11□□□□□ -0.31
SEC13-208ENST00000397109 EIF4E2O60573 245 aaKnown RBP13.11□□□□□ -0.31
SEC13-208ENST00000397109 UMPSP11172 480 aa13.11□□□□□ -0.31
SEC13-208ENST00000397109 HOXB6P17509 224 aaKnown RBP13.11□□□□□ -0.31
SEC13-208ENST00000397109 UQCRC1P31930 480 aa13.11□□□□□ -0.31
SEC13-208ENST00000397109 MAGEA8P43361 318 aa13.11□□□□□ -0.31
SEC13-208ENST00000397109 SUCLG1P53597 346 aaKnown RBP13.11□□□□□ -0.31
SEC13-208ENST00000397109 DLX5P56178 289 aa13.11□□□□□ -0.31
SEC13-208ENST00000397109 CLDN15P56746 228 aa13.11□□□□□ -0.31
SEC13-208ENST00000397109 RAC1P63000 192 aa13.11□□□□□ -0.31
SEC13-208ENST00000397109 GPR68Q15743 365 aa13.11□□□□□ -0.31
SEC13-208ENST00000397109 ZNF141Q15928 474 aa13.11□□□□□ -0.31
SEC13-208ENST00000397109 C6orf10Q5SRN2 563 aa13.11□□□□□ -0.31
SEC13-208ENST00000397109 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.11□□□□□ -0.31
SEC13-208ENST00000397109 AP1ARQ63HQ0 302 aa13.11□□□□□ -0.31
SEC13-208ENST00000397109 NANOGP8Q6NSW7 305 aa13.11□□□□□ -0.31
SEC13-208ENST00000397109 TNFAIP8L2Q6P589 184 aaPredicted RBP13.11□□□□□ -0.31
SEC13-208ENST00000397109 KIF18BQ86Y91 864 aa13.11□□□□□ -0.31
SEC13-208ENST00000397109 METTL25Q8N6Q8 603 aa13.11□□□□□ -0.31
SEC13-208ENST00000397109 ZNF614Q8N883 585 aa13.11□□□□□ -0.31
SEC13-208ENST00000397109 BHLHE22Q8NFJ8 381 aaPredicted RBP13.11□□□□□ -0.31
SEC13-208ENST00000397109 PYDC1Q8WXC3 89 aa13.11□□□□□ -0.31
SEC13-208ENST00000397109 SMPDL3BQ92485 455 aa13.11□□□□□ -0.31
SEC13-208ENST00000397109 INTS12Q96CB8 462 aaKnown RBP13.11□□□□□ -0.31
SEC13-208ENST00000397109 CGREF1Q99674 301 aa13.11□□□□□ -0.31
SEC13-208ENST00000397109 PIGMQ9H3S5 423 aa13.11□□□□□ -0.31
SEC13-208ENST00000397109 NANOGQ9H9S0 305 aa13.11□□□□□ -0.31
SEC13-208ENST00000397109 SLC6A13Q9NSD5 602 aa13.11□□□□□ -0.31
SEC13-208ENST00000397109 CARD8Q9Y2G2 431 aa13.11□□□□□ -0.31
SEC13-208ENST00000397109 PCDHB14Q9Y5E9 798 aa13.11□□□□□ -0.31
SEC13-208ENST00000397109 SERINC4A6NH21 518 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 EEF1E1-BLOC1S5C9J1V9 151 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 NME4O00746 187 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 ZNF264O43296 627 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 EEF1E1O43324 174 aaKnown RBP13.1□□□□□ -0.31
SEC13-208ENST00000397109 KRT75O95678 551 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 BAG2O95816 211 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 NUDT14O95848 222 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 TGM6O95932 706 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 LINGO3P0C6S8 592 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 UBL4AP11441 157 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 ACADSP16219 412 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 ADH6P28332 368 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 SLC7A1P30825 629 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 CLDN20P56880 219 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 ZNF117Q03924 483 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 TLE4Q04727 773 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 SGCBQ16585 318 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 PDSS1Q5T2R2 415 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 PDZK1Q5T2W1 519 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 LCN8Q6JVE9 175 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 MSRB3Q8IXL7 192 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 PQLC1Q8N2U9 271 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 TOR1AIP2Q8NFQ8 470 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 ZFP90Q8TF47 636 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 DNAJC9Q8WXX5 260 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 RAB8BQ92930 207 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 RNF145Q96MT1 663 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 ZNF559Q9BR84 538 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 PINK1Q9BXM7 581 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 SAP130Q9H0E3 1048 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 ALG2Q9H553 416 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 MCCC2Q9HCC0 563 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 CMTM6Q9NX76 183 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 SLC25A37Q9NYZ2 338 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 JKAMPQ9P055 326 aa13.1□□□□□ -0.31
SEC13-208ENST00000397109 SLAMF8Q9P0V8 285 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms