RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 MPEG1Q2M385 716 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 AADACL3Q5VUY0 350 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 ZNF813Q6ZN06 617 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 IQCF1Q8N6M8 205 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 LIPHQ8WWY8 451 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 DTD2Q96FN9 168 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 RANBP9Q96S59 729 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 TIMM29Q9BSF4 260 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 CENPOQ9BU64 300 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 SLC6A20Q9NP91 592 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 PLCXD1Q9NUJ7 323 aa6.75□□□□□ -1.33
UPF2-203ENST00000397053 ZNF587BE7ETH6 402 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 SDHDO14521 159 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 DENRO43583 198 aaKnown RBP6.74□□□□□ -1.33
UPF2-203ENST00000397053 DRD5P21918 477 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 NFYBP25208 207 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 ITGB8P26012 769 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 GABRA4P48169 554 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 TGM4P49221 684 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 AGFG1P52594 562 aaKnown RBP6.74□□□□□ -1.33
UPF2-203ENST00000397053 ZNF674Q2M3X9 581 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 CDONQ4KMG0 1287 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 TMEM31Q5JXX7 168 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 BRICD5Q6PL45 260 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 CBARPQ8N350 705 aaPredicted RBP6.74□□□□□ -1.33
UPF2-203ENST00000397053 STEAP2Q8NFT2 490 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 ZFPM2Q8WW38 1151 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 MAL2Q969L2 176 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 INTS12Q96CB8 462 aaKnown RBP6.74□□□□□ -1.33
UPF2-203ENST00000397053 TXN2Q99757 166 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 CTRCQ99895 268 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 OLAHQ9NV23 265 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 H3BSA7 217 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 GABARAPH6UMI1 98 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 BET1O15155 118 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 SLC22A5O76082 557 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 GLCEO94923 617 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 GABARAPO95166 117 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 RPS2P15880 293 aaKnown RBP6.74□□□□□ -1.33
UPF2-203ENST00000397053 TGM1P22735 817 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 KIR2DL3P43628 341 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 CLDN17P56750 224 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 FOXC1Q12948 553 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 MFAP5Q13361 173 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 TBRG1Q3YBR2 411 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 DCST2Q5T1A1 773 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 CCNJQ5T5M9 372 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 WBP2NLQ6ICG8 309 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 OR7E24Q6IFN5 339 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 DPPA4Q7L190 304 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 CMTM2Q8TAZ6 248 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 C11orf40Q8WZ69 217 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 C3orf49Q96BT1 292 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 OSBPL7Q9BZF2 842 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 ANKRD19PQ9H560 264 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 ZNF286AQ9HBT8 521 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 TMEM165Q9HC07 324 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 UBQLN2Q9UHD9 624 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 STYXL1Q9Y6J8 313 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 CSNK1G3Q9Y6M4 447 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 POLR1AO95602 1720 aaPredicted RBP6.74□□□□□ -1.33
UPF2-203ENST00000397053 A8MV72 311 aaPredicted RBP6.74□□□□□ -1.33
UPF2-203ENST00000397053 ZNF814B7Z6K7 855 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 SMAD6O43541 496 aaKnown RBP6.74□□□□□ -1.33
UPF2-203ENST00000397053 KIAA0513O60268 411 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 RGS11O94810 467 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 SNAP29O95721 258 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 EGFP01133 1207 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 ARSBP15848 533 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 CNR2P34972 360 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 RGRP47804 291 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 SLC6A11P48066 632 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 CARD18P57730 90 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 NCS1P62166 190 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 GPR176Q14439 515 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 RTL6Q6ICC9 239 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 HEPHL1Q6MZM0 1159 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 FAM57BQ71RH2 274 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 GDPD3Q7L5L3 318 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 DNAJC22Q8N4W6 341 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 ST7LQ8TDW4 575 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 DUSP19Q8WTR2 217 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 SLC45A3Q96JT2 553 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 PCYT2Q99447 389 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 MENTQ9BUN1 341 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 PBX4Q9BYU1 374 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 METTL9Q9H1A3 318 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 FOLH1BQ9HBA9 442 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 KCNJ16Q9NPI9 418 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 IL17CQ9P0M4 197 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 SLC23A2Q9UGH3 650 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 TMEM59LQ9UK28 342 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 MYO7AQ13402 2215 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 H7C1Q1 480 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 PTGESO14684 152 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 GPR32O75388 356 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 STT3AP46977 705 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 MTCP1P56278 107 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 CXADRP78310 365 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 ATP6AP1Q15904 470 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms