RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 DPH1Q9BZG8 443 aa12.41□□□□□ -0.42
MCF2L-209ENST00000397036 METTL7AQ9H8H3 244 aa12.41□□□□□ -0.42
MCF2L-209ENST00000397036 STMN3Q9NZ72 180 aa12.41□□□□□ -0.42
MCF2L-209ENST00000397036 ABI3Q9P2A4 366 aa12.41□□□□□ -0.42
MCF2L-209ENST00000397036 DKK4Q9UBT3 224 aa12.41□□□□□ -0.42
MCF2L-209ENST00000397036 KLK13Q9UKR3 277 aa12.41□□□□□ -0.42
MCF2L-209ENST00000397036 NDRG4Q9ULP0 352 aaKnown RBP12.41□□□□□ -0.42
MCF2L-209ENST00000397036 HSPE1-MOB4S4R3N1 261 aa12.41□□□□□ -0.42
MCF2L-209ENST00000397036 HEATR5AQ86XA9 2040 aa12.4□□□□□ -0.42
MCF2L-209ENST00000397036 WDFY3Q8IZQ1 3526 aa12.4□□□□□ -0.42
MCF2L-209ENST00000397036 PCSK5Q92824 1860 aa12.4□□□□□ -0.42
MCF2L-209ENST00000397036 LOC100130705A0A1B0GUX0 176 aa12.4□□□□□ -0.42
MCF2L-209ENST00000397036 ZNF891A8MT65 544 aaPredicted RBP12.4□□□□□ -0.42
MCF2L-209ENST00000397036 MITFO75030 526 aaPredicted RBP12.4□□□□□ -0.42
MCF2L-209ENST00000397036 OSMP13725 252 aa12.4□□□□□ -0.42
MCF2L-209ENST00000397036 FPR3P25089 353 aa12.4□□□□□ -0.42
MCF2L-209ENST00000397036 HTR3AP46098 478 aa12.4□□□□□ -0.42
MCF2L-209ENST00000397036 FOXC1Q12948 553 aa12.4□□□□□ -0.42
MCF2L-209ENST00000397036 COL28A1Q2UY09 1125 aa12.4□□□□□ -0.42
MCF2L-209ENST00000397036 SLC25A53Q5H9E4 307 aa12.4□□□□□ -0.42
MCF2L-209ENST00000397036 FCRLBQ6BAA4 426 aa12.4□□□□□ -0.42
MCF2L-209ENST00000397036 KLHL17Q6TDP4 642 aa12.4□□□□□ -0.42
MCF2L-209ENST00000397036 WDR88Q6ZMY6 472 aa12.4□□□□□ -0.42
MCF2L-209ENST00000397036 PRICKLE2Q7Z3G6 844 aa12.4□□□□□ -0.42
MCF2L-209ENST00000397036 SIRT6Q8N6T7 355 aa12.4□□□□□ -0.42
MCF2L-209ENST00000397036 FADS6Q8N9I5 356 aa12.4□□□□□ -0.42
MCF2L-209ENST00000397036 TMEM255BQ8WV15 326 aa12.4□□□□□ -0.42
MCF2L-209ENST00000397036 TMEM234Q8WY98 164 aa12.4□□□□□ -0.42
MCF2L-209ENST00000397036 HRASLS5Q96KN8 279 aa12.4□□□□□ -0.42
MCF2L-209ENST00000397036 PITX2Q99697 317 aa12.4□□□□□ -0.42
MCF2L-209ENST00000397036 KLRF1Q9NZS2 232 aa12.4□□□□□ -0.42
MCF2L-209ENST00000397036 REV1Q9UBZ9 1251 aa12.4□□□□□ -0.42
MCF2L-209ENST00000397036 POLHQ9Y253 713 aa12.4□□□□□ -0.42
MCF2L-209ENST00000397036 MED31Q9Y3C7 131 aa12.4□□□□□ -0.42
MCF2L-209ENST00000397036 MASP2O00187 686 aa12.39□□□□□ -0.43
MCF2L-209ENST00000397036 GP1BBP13224 206 aa12.39□□□□□ -0.43
MCF2L-209ENST00000397036 MST1P26927 711 aa12.39□□□□□ -0.43
MCF2L-209ENST00000397036 ITPKBP27987 946 aa12.39□□□□□ -0.43
MCF2L-209ENST00000397036 CYB561P49447 251 aa12.39□□□□□ -0.43
MCF2L-209ENST00000397036 ZIK1Q3SY52 487 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-209ENST00000397036 ABHD17BQ5VST6 288 aa12.39□□□□□ -0.43
MCF2L-209ENST00000397036 B3GNTL1Q67FW5 361 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-209ENST00000397036 TTC33Q6PID6 262 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-209ENST00000397036 RASSF6Q6ZTQ3 369 aa12.39□□□□□ -0.43
MCF2L-209ENST00000397036 GRINAQ7Z429 371 aa12.39□□□□□ -0.43
MCF2L-209ENST00000397036 VASH2Q86V25 355 aa12.39□□□□□ -0.43
MCF2L-209ENST00000397036 CDK20Q8IZL9 346 aa12.39□□□□□ -0.43
MCF2L-209ENST00000397036 CADM2Q8N3J6 435 aa12.39□□□□□ -0.43
MCF2L-209ENST00000397036 GALNT16Q8N428 558 aa12.39□□□□□ -0.43
MCF2L-209ENST00000397036 TMCO5AQ8N6Q1 288 aa12.39□□□□□ -0.43
MCF2L-209ENST00000397036 CLDN22Q8N7P3 220 aa12.39□□□□□ -0.43
MCF2L-209ENST00000397036 ZNF248Q8NDW4 579 aa12.39□□□□□ -0.43
MCF2L-209ENST00000397036 SNIP1Q8TAD8 396 aaKnown RBP12.39□□□□□ -0.43
MCF2L-209ENST00000397036 CYGBQ8WWM9 190 aa12.39□□□□□ -0.43
MCF2L-209ENST00000397036 SH3YL1Q96HL8 342 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-209ENST00000397036 TMEM41AQ96HV5 264 aa12.39□□□□□ -0.43
MCF2L-209ENST00000397036 ZNF570Q96NI8 536 aa12.39□□□□□ -0.43
MCF2L-209ENST00000397036 SCNM1Q9BWG6 230 aa12.39□□□□□ -0.43
MCF2L-209ENST00000397036 RNF32Q9H0A6 362 aa12.39□□□□□ -0.43
MCF2L-209ENST00000397036 PROK2Q9HC23 129 aa12.39□□□□□ -0.43
MCF2L-209ENST00000397036 TAS2R10Q9NYW0 307 aa12.39□□□□□ -0.43
MCF2L-209ENST00000397036 PPP4R1LQ9P1A2 415 aa12.39□□□□□ -0.43
MCF2L-209ENST00000397036 DOCK10Q96BY6 2186 aa12.39□□□□□ -0.43
MCF2L-209ENST00000397036 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.38□□□□□ -0.43
MCF2L-209ENST00000397036 NKX2-8O15522 239 aa12.38□□□□□ -0.43
MCF2L-209ENST00000397036 ITGA3P26006 1051 aa12.38□□□□□ -0.43
MCF2L-209ENST00000397036 POLR2IP36954 125 aaKnown RBP12.38□□□□□ -0.43
MCF2L-209ENST00000397036 CRISP1P54107 249 aa12.38□□□□□ -0.43
MCF2L-209ENST00000397036 LSM11P83369 360 aaKnown RBP eCLIP12.38□□□□□ -0.43
MCF2L-209ENST00000397036 QPRTQ15274 297 aa12.38□□□□□ -0.43
MCF2L-209ENST00000397036 ZNF468Q5VIY5 522 aaPredicted RBP12.38□□□□□ -0.43
MCF2L-209ENST00000397036 C5orf46Q6UWT4 87 aa12.38□□□□□ -0.43
MCF2L-209ENST00000397036 GALNT5Q7Z7M9 940 aa12.38□□□□□ -0.43
MCF2L-209ENST00000397036 NRMQ8IXM6 262 aa12.38□□□□□ -0.43
MCF2L-209ENST00000397036 CYP4Z2PQ8N1L4 340 aa12.38□□□□□ -0.43
MCF2L-209ENST00000397036 SLC43A2Q8N370 569 aa12.38□□□□□ -0.43
MCF2L-209ENST00000397036 ZNF563Q8TA94 476 aa12.38□□□□□ -0.43
MCF2L-209ENST00000397036 LIPHQ8WWY8 451 aa12.38□□□□□ -0.43
MCF2L-209ENST00000397036 GTPBP3Q969Y2 492 aaKnown RBP12.38□□□□□ -0.43
MCF2L-209ENST00000397036 GPA33Q99795 319 aa12.38□□□□□ -0.43
MCF2L-209ENST00000397036 GALNT9Q9HCQ5 603 aa12.38□□□□□ -0.43
MCF2L-209ENST00000397036 MEPEQ9NQ76 525 aaPredicted RBP12.38□□□□□ -0.43
MCF2L-209ENST00000397036 EXPH5Q8NEV8 1989 aa12.38□□□□□ -0.43
MCF2L-209ENST00000397036 A0A087WZY1 265 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 ELOA3DA6NLF2 546 aaPredicted RBP12.37□□□□□ -0.43
MCF2L-209ENST00000397036 SNPHO15079 494 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 NTN1O95631 604 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 TP53P04637 393 aaPredicted RBP12.37□□□□□ -0.43
MCF2L-209ENST00000397036 CCL3P10147 92 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 FKBP2P26885 142 aaKnown RBP12.37□□□□□ -0.43
MCF2L-209ENST00000397036 ADH6P28332 368 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 CASRP41180 1078 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 CCR4P51679 360 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 POLR2HP52434 150 aaKnown RBP12.37□□□□□ -0.43
MCF2L-209ENST00000397036 PDK3Q15120 406 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 ELOA3BQ3SY89 546 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 ZNF691Q5VV52 312 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 ZNF227Q86WZ6 799 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 PLCZ1Q86YW0 608 aa12.37□□□□□ -0.43
MCF2L-209ENST00000397036 BEST3Q8N1M1 668 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms