RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 ADH1AP07327 375 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 RAB28P51157 221 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 PRR5P85299 388 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 ELAVL3Q14576 367 aaKnown RBP12.88□□□□□ -0.35
NUP98-204ENST00000397004 TP53I3Q53FA7 332 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 OR51L1Q8NGJ5 315 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 OR51A7Q8NH64 312 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 KCTD12Q96CX2 325 aaKnown RBP12.88□□□□□ -0.35
NUP98-204ENST00000397004 DPAGT1Q9H3H5 408 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 ZCCHC4Q9H5U6 513 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 TRIM36Q9NQ86 728 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 CA10Q9NS85 328 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 USP36Q9P275 1121 aaKnown RBP12.88□□□□□ -0.35
NUP98-204ENST00000397004 ING4Q9UNL4 249 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 SLC27A6Q9Y2P4 619 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 NUBP2Q9Y5Y2 271 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 IDSB3KWA1 339 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 SLC35G4P0C7Q5 338 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 POU3F2P20265 443 aaPredicted RBP12.88□□□□□ -0.35
NUP98-204ENST00000397004 PRKACBP22694 351 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 SLC16A1P53985 500 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 BTN3A2P78410 334 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 ID2Q02363 134 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 AANATQ16613 207 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 SFRP4Q6FHJ7 346 aaPredicted RBP12.88□□□□□ -0.35
NUP98-204ENST00000397004 FAAP20Q6NZ36 180 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 KANSL1Q7Z3B3 1105 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 TOMM5Q8N4H5 51 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 HS6ST2Q96MM7 605 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 DMRTA2Q96SC8 542 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 PCBD2Q9H0N5 130 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 RANBP3Q9H6Z4 567 aaPredicted RBP12.88□□□□□ -0.35
NUP98-204ENST00000397004 CMC2Q9NRP2 79 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 AK6Q9Y3D8 172 aaKnown RBP12.88□□□□□ -0.35
NUP98-204ENST00000397004 NPTNQ9Y639 398 aa12.88□□□□□ -0.35
NUP98-204ENST00000397004 PRR19A6NJB7 356 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 PRR32B1ATL7 298 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 PIN1P1O15428 100 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 DHFRP00374 187 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 MPIP34949 423 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 ST8SIA6P61647 398 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 OR1Q1Q15612 314 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 TMEM35AQ53FP2 167 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 C2orf27AQ580R0 203 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 OR2M2Q96R28 347 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 MRPS30Q9NP92 439 aaKnown RBP12.87□□□□□ -0.35
NUP98-204ENST00000397004 PIPOXQ9P0Z9 390 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 SYNDIG1LA6NDD5 238 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 PTP4A3O75365 173 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 HMGN1P05114 100 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 PAICSP22234 425 aaKnown RBP12.87□□□□□ -0.35
NUP98-204ENST00000397004 TALDO1P37837 337 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 SNTA1Q13424 505 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 CSRP2Q16527 193 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 MRPL2Q5T653 305 aaKnown RBP12.87□□□□□ -0.35
NUP98-204ENST00000397004 KIAA1324Q6UXG2 1013 aaKnown RBP12.87□□□□□ -0.35
NUP98-204ENST00000397004 ASPGQ86U10 573 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 COMMD7Q86VX2 200 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 MS4A15Q8N5U1 240 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 ADAMTS14Q8WXS8 1223 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 OR8D1Q8WZ84 308 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 SMPDL3BQ92485 455 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 MSANTD3Q96H12 275 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 PDCD1LG2Q9BQ51 273 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 PITHD1Q9GZP4 211 aaPredicted RBP12.87□□□□□ -0.35
NUP98-204ENST00000397004 TMEM168Q9H0V1 697 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 METTL17Q9H7H0 456 aaPredicted RBP12.87□□□□□ -0.35
NUP98-204ENST00000397004 OR6C2Q9NZP2 312 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 WDR45Q9Y484 360 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 CFAP54Q96N23 3096 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 F8A1P23610 371 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 ADGRD2Q7Z7M1 963 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 CMIPQ8IY22 773 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 TMEM239Q8WW34 195 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 PELI1Q96FA3 418 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 NKIRAS2Q9NYR9 191 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 SLC13A4Q9UKG4 626 aa12.87□□□□□ -0.35
NUP98-204ENST00000397004 PCDHGA9Q9Y5G4 932 aaKnown RBP12.87□□□□□ -0.35
NUP98-204ENST00000397004 C4orf47A7E2U8 309 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 RGS11O94810 467 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 ASGR2P07307 311 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 RAB3BP20337 219 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 GID4Q8IVV7 300 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 LSMEM1Q8N8F7 131 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 ADAMTS15Q8TE58 950 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 OR14A2Q96R54 314 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 TEX101Q9BY14 249 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 NTMQ9P121 344 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 SPTBP11277 2137 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 UBL3O95164 117 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 PCDH8O95206 1070 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 MT-ND5P03915 603 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 ZNF267Q14586 743 aaPredicted RBP12.86□□□□□ -0.35
NUP98-204ENST00000397004 FAM199XQ6PEV8 388 aaPredicted RBP12.86□□□□□ -0.35
NUP98-204ENST00000397004 CMTM4Q8IZR5 234 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 TMEM52Q8NDY8 209 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 CXorf40AQ8TE69 158 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 FN3KQ9H479 309 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 SYNDIG1Q9H7V2 258 aa12.86□□□□□ -0.35
NUP98-204ENST00000397004 PRSS16Q9NQE7 514 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms