RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 UAP1Q16222 522 aaPredicted RBP7.36□□□□□ -1.23
SCFD1-202ENST00000396629 ZNF678Q5SXM1 525 aa7.36□□□□□ -1.23
SCFD1-202ENST00000396629 GPRIN3Q6ZVF9 776 aa7.36□□□□□ -1.23
SCFD1-202ENST00000396629 C17orf78Q8N4C9 275 aa7.36□□□□□ -1.23
SCFD1-202ENST00000396629 FAM76AQ8TAV0 307 aa7.36□□□□□ -1.23
SCFD1-202ENST00000396629 ZDHHC16Q969W1 377 aa7.36□□□□□ -1.23
SCFD1-202ENST00000396629 APH1AQ96BI3 265 aa7.36□□□□□ -1.23
SCFD1-202ENST00000396629 OR5B2Q96R09 309 aa7.36□□□□□ -1.23
SCFD1-202ENST00000396629 VRK1Q99986 396 aaPredicted RBP7.36□□□□□ -1.23
SCFD1-202ENST00000396629 METTL17Q9H7H0 456 aaPredicted RBP7.36□□□□□ -1.23
SCFD1-202ENST00000396629 DCTN4Q9UJW0 460 aa7.36□□□□□ -1.23
SCFD1-202ENST00000396629 NOSIPQ9Y314 301 aaKnown RBP7.36□□□□□ -1.23
SCFD1-202ENST00000396629 NPIPA5A0A0B4J1W7 369 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 B9A039 149 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 NPIPA7E9PJI5 369 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 ENO1P06733 434 aaKnown RBP7.35□□□□□ -1.23
SCFD1-202ENST00000396629 ALOX5P09917 674 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 NPIPA8P0DM63 369 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 GPC1P35052 558 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 PPOXP50336 477 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 POU6F2P78424 691 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-202ENST00000396629 CAV1Q03135 178 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 MLC1Q15049 377 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 CCNJQ5T5M9 372 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 C3orf33Q6P1S2 294 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 LRIG3Q6UXM1 1119 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 TMPPEQ6ZT21 453 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 IKBIPQ70UQ0 350 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 SLC46A3Q7Z3Q1 461 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 MTDHQ86UE4 582 aaKnown RBP7.35□□□□□ -1.23
SCFD1-202ENST00000396629 COX18Q8N8Q8 333 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 C1orf162Q8NEQ5 155 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-202ENST00000396629 FBXO30Q8TB52 745 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 ARL8AQ96BM9 186 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 C16orf58Q96GQ5 468 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 ZNF764Q96H86 408 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-202ENST00000396629 MS4A4EQ96PG1 132 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 BTBD2Q9BX70 525 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 HOXD1Q9GZZ0 328 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 ANKZF1Q9H8Y5 726 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 MOKQ9UQ07 419 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 ESPNB1AK53 854 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 PDPK1O15530 556 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 PDE5AO76074 875 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 SUPT7LO94864 414 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 SERPINF1P36955 418 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 FRKP42685 505 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-202ENST00000396629 PAFAH1B1P43034 410 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 DIO1P49895 249 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 IDH3GP51553 393 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-202ENST00000396629 ARFIP2P53365 341 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 SLC16A1P53985 500 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 PLTPP55058 493 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 PKNOX1P55347 436 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 CSNK2A1P68400 391 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-202ENST00000396629 EFNB3Q15768 340 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 SPDYAQ5MJ70 313 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 RINLQ6ZS11 566 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 USP43Q70EL4 1123 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 PEG10Q86TG7 708 aaKnown RBP7.35□□□□□ -1.23
SCFD1-202ENST00000396629 ZNF527Q8NB42 609 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 OR5W2Q8NH69 310 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 FBXO25Q8TCJ0 367 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 ZNF418Q8TF45 676 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-202ENST00000396629 STACQ99469 402 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 RBM4Q9BWF3 364 aaKnown RBP7.35□□□□□ -1.23
SCFD1-202ENST00000396629 SAP130Q9H0E3 1048 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 PLK3Q9H4B4 646 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 GIN1Q9NXP7 522 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 STK38LQ9Y2H1 464 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 POLR3HQ9Y535 204 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-202ENST00000396629 TIMM22Q9Y584 194 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 TRRAPQ9Y4A5 3859 aa7.35□□□□□ -1.23
SCFD1-202ENST00000396629 A0A0G2JK05 382 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 CCDC151A5D8V7 595 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 NPIPB9F8W1W9 429 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 H3BNH8 94 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 TRIM77I1YAP6 450 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 GTPBP1O00178 669 aaKnown RBP7.34□□□□□ -1.23
SCFD1-202ENST00000396629 GPR171O14626 319 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 RAD51CO43502 376 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 EIF4E2O60573 245 aaKnown RBP7.34□□□□□ -1.23
SCFD1-202ENST00000396629 TBX19O60806 448 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 DNAJA2O60884 412 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 SNUPNO95149 360 aaKnown RBP7.34□□□□□ -1.23
SCFD1-202ENST00000396629 SLU7O95391 586 aaKnown RBP7.34□□□□□ -1.23
SCFD1-202ENST00000396629 HILS1P60008 231 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 DEFA6Q01524 100 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 SCGB2A2Q13296 93 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 RIN1Q13671 783 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 QPRTQ15274 297 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 NDUFAF6Q330K2 333 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 ZNF385BQ569K4 471 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.34□□□□□ -1.23
SCFD1-202ENST00000396629 NOXRED1Q6NXP6 359 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 ZDHHC24Q6UX98 284 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 ZNF786Q8N393 782 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 TOR1AIP2Q8NFQ8 470 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 OR52E4Q8NGH9 312 aa7.34□□□□□ -1.23
SCFD1-202ENST00000396629 ZFP28Q8NHY6 868 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms