RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 NRG3P56975 720 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 STXBP1P61764 594 aaKnown RBP12.34□□□□□ -0.43
TRIM40-207ENST00000396581 EEF1A1P68104 462 aaKnown RBP12.34□□□□□ -0.43
TRIM40-207ENST00000396581 DGCR2P98153 550 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 BAMBIQ13145 260 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 FGFBP1Q14512 234 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 RPL13AP3Q6NVV1 102 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 TMEM65Q6PI78 240 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 ZNF836Q6ZNA1 936 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 COMMD7Q86VX2 200 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 ADGRG3Q86Y34 549 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 HDDC3Q8N4P3 179 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 RAB42Q8N4Z0 105 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 UXS1Q8NBZ7 420 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 OR52L1Q8NGH7 329 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 RPLP0P6Q8NHW5 317 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 FANK1Q8TC84 345 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 SLC2A12Q8TD20 617 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 CCDC120Q96HB5 630 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 CD180Q99467 661 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 ENKD1Q9H0I2 346 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 CLEC4MQ9H2X3 399 aaPredicted RBP12.34□□□□□ -0.43
TRIM40-207ENST00000396581 ADGRL4Q9HBW9 690 aa12.34□□□□□ -0.43
TRIM40-207ENST00000396581 LYARQ9NX58 379 aaKnown RBP12.34□□□□□ -0.43
TRIM40-207ENST00000396581 A0A1B0GTQ1 180 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 TRABD2BA6NFA1 517 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 LRRN3E7EW58 273 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 CDK2AP1O14519 115 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 PRICKLE3O43900 615 aaPredicted RBP12.33□□□□□ -0.44
TRIM40-207ENST00000396581 AGR2O95994 175 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 APODP05090 189 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 THBS1P07996 1170 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 SYPP08247 313 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 ANKRD34CP0C6C1 535 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 IL9P15248 144 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 TYRP1P17643 537 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 ATF1P18846 271 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 MAKP20794 623 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 TEAD1P28347 426 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 ZNF81P51508 661 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 CDK3Q00526 305 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 FOXK2Q01167 660 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 DHODHQ02127 395 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 DUSP8Q13202 625 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 AGERQ15109 404 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 POU4F3Q15319 338 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 MLF2Q15773 248 aaPredicted RBP12.33□□□□□ -0.44
TRIM40-207ENST00000396581 MAPK14Q16539 360 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 ARHGAP11BQ3KRB8 267 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 ACSM3Q53FZ2 586 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 GARNL3Q5VVW2 1013 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 MFSD12Q6NUT3 480 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 WDR88Q6ZMY6 472 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 RTL4Q6ZR62 310 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 GPAT4Q86UL3 456 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 OR10H4Q8NGA5 316 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 SMIM4Q8WVI0 70 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 OMA1Q96E52 524 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 WBP1Q96G27 269 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 C4orf36Q96KX1 117 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 TBX5Q99593 518 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 DPCDQ9BVM2 203 aaPredicted RBP12.33□□□□□ -0.44
TRIM40-207ENST00000396581 DPH1Q9BZG8 443 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 LRRN3Q9H3W5 708 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 PLEKHA1Q9HB21 404 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 EQTNQ9NQ60 294 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 ST6GALNAC2Q9UJ37 374 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 SPATA2Q9UM82 520 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 TNRC18O15417 2968 aaPredicted RBP12.33□□□□□ -0.44
TRIM40-207ENST00000396581 HEATR5BQ9P2D3 2071 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 TBC1D3KA0A087X1G2 549 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 CIB4A0PJX0 185 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 TRAPPC13A5PLN9 417 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 TBC1D3FA6NER0 549 aaPredicted RBP12.33□□□□□ -0.44
TRIM40-207ENST00000396581 RNGTTO60942 597 aaKnown RBP12.33□□□□□ -0.44
TRIM40-207ENST00000396581 ITGA10O75578 1167 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 TGM6O95932 706 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 SLC35G4P0C7Q5 338 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 EPXP11678 715 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 RAB28P51157 221 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 CCR6P51684 374 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 SLC3A1Q07837 685 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 HTR4Q13639 388 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 EIPR1Q53HC9 387 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 TBC1D3GQ6DHY5 549 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 TMPRSS11FQ6ZWK6 438 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 OR2L8Q8NGY9 312 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 ADAMTS15Q8TE58 950 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 C10orf90Q96M02 699 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 LGR4Q9BXB1 951 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 HDAC8Q9BY41 377 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 KCMF1Q9P0J7 381 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 ACSL5Q9ULC5 683 aa12.33□□□□□ -0.44
TRIM40-207ENST00000396581 FAM86C2PA6NEL3 165 aa12.32□□□□□ -0.44
TRIM40-207ENST00000396581 C1QTNF3-AMACRE9PGA6 284 aa12.32□□□□□ -0.44
TRIM40-207ENST00000396581 PRR23D1E9PI22 279 aaPredicted RBP12.32□□□□□ -0.44
TRIM40-207ENST00000396581 OGG1O15527 345 aa12.32□□□□□ -0.44
TRIM40-207ENST00000396581 PRAF2O60831 178 aa12.32□□□□□ -0.44
TRIM40-207ENST00000396581 PEX14O75381 377 aa12.32□□□□□ -0.44
TRIM40-207ENST00000396581 REM1O75628 298 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms