RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 PSMF1Q92530 271 aa11.6□□□□□ -0.55
TRIM39-204ENST00000396548 CCNL2Q96S94 520 aaPredicted RBP11.6□□□□□ -0.55
TRIM39-204ENST00000396548 TBL1XR1Q9BZK7 514 aa11.6□□□□□ -0.55
TRIM39-204ENST00000396548 DSN1Q9H410 356 aa11.6□□□□□ -0.55
TRIM39-204ENST00000396548 C12orf10Q9HB07 376 aa11.6□□□□□ -0.55
TRIM39-204ENST00000396548 RNF6Q9Y252 685 aa11.6□□□□□ -0.55
TRIM39-204ENST00000396548 YARS2Q9Y2Z4 477 aaKnown RBP11.6□□□□□ -0.55
TRIM39-204ENST00000396548 CUL9Q8IWT3 2517 aa11.6□□□□□ -0.55
TRIM39-204ENST00000396548 ETV2O00321 342 aaPredicted RBP11.6□□□□□ -0.55
TRIM39-204ENST00000396548 IGF2P01344 180 aa11.6□□□□□ -0.55
TRIM39-204ENST00000396548 IFNGR2P38484 337 aa11.6□□□□□ -0.55
TRIM39-204ENST00000396548 IDH2P48735 452 aaKnown RBP11.6□□□□□ -0.55
TRIM39-204ENST00000396548 TOMM34Q15785 309 aaPredicted RBP11.6□□□□□ -0.55
TRIM39-204ENST00000396548 SLX4IPQ5VYV7 408 aa11.6□□□□□ -0.55
TRIM39-204ENST00000396548 OR8D4Q8NGM9 314 aa11.6□□□□□ -0.55
TRIM39-204ENST00000396548 OR5W2Q8NH69 310 aa11.6□□□□□ -0.55
TRIM39-204ENST00000396548 HDAC2Q92769 488 aaKnown RBP11.6□□□□□ -0.55
TRIM39-204ENST00000396548 PLA2G12AQ9BZM1 189 aa11.6□□□□□ -0.55
TRIM39-204ENST00000396548 PROK2Q9HC23 129 aa11.6□□□□□ -0.55
TRIM39-204ENST00000396548 GTPBP1O00178 669 aaKnown RBP11.59□□□□□ -0.55
TRIM39-204ENST00000396548 LINGO3P0C6S8 592 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 P2RX1P51575 399 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 NUP107P57740 925 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 C6orf141Q5SZD1 244 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 TMEM236Q5W0B7 351 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 CLDN22Q8N7P3 220 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 RHOXF1Q8NHV9 184 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 CDCP1Q9H5V8 836 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 IL20Q9NYY1 176 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 MYRFQ9Y2G1 1151 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 SERPINA7P05543 415 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 SLC1A3P43003 542 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 TMED10P49755 219 aaKnown RBP11.59□□□□□ -0.55
TRIM39-204ENST00000396548 RTP5Q14D33 572 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 BICRALQ6AI39 1079 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 CADM2Q8N3J6 435 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 SETD9Q8NE22 299 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 OR5M3Q8NGP4 307 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 SLC25A19Q9HC21 320 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 GALNT9Q9HCQ5 603 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 ATP13A2Q9NQ11 1180 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 EML6Q6ZMW3 1958 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 SCO2O43819 266 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 PTP4A3O75365 173 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 SOX14O95416 240 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 CRHBPP24387 322 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 CASP3P42574 277 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 GPR4P46093 362 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 ATP1A4Q13733 1029 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 TMEM154Q6P9G4 183 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 TTC33Q6PID6 262 aaPredicted RBP11.59□□□□□ -0.55
TRIM39-204ENST00000396548 DND1Q8IYX4 353 aaKnown RBP11.59□□□□□ -0.55
TRIM39-204ENST00000396548 CNIH3Q8TBE1 160 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 DUSP19Q8WTR2 217 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 APOL4Q9BPW4 351 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 EGLN3Q9H6Z9 239 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 CPNE5Q9HCH3 593 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 AASSQ9UDR5 926 aa11.59□□□□□ -0.55
TRIM39-204ENST00000396548 HCRTR2O43614 444 aa11.58□□□□□ -0.56
TRIM39-204ENST00000396548 PTNP21246 168 aa11.58□□□□□ -0.56
TRIM39-204ENST00000396548 RBMS1P29558 406 aaKnown RBP11.58□□□□□ -0.56
TRIM39-204ENST00000396548 TEKQ02763 1124 aa11.58□□□□□ -0.56
TRIM39-204ENST00000396548 EGR4Q05215 589 aa11.58□□□□□ -0.56
TRIM39-204ENST00000396548 C17orf67Q0P5P2 114 aa11.58□□□□□ -0.56
TRIM39-204ENST00000396548 RBM48Q5RL73 367 aaKnown RBP11.58□□□□□ -0.56
TRIM39-204ENST00000396548 FCRLBQ6BAA4 426 aa11.58□□□□□ -0.56
TRIM39-204ENST00000396548 RPS19BP1Q86WX3 136 aaKnown RBP11.58□□□□□ -0.56
TRIM39-204ENST00000396548 CCDC103Q8IW40 242 aa11.58□□□□□ -0.56
TRIM39-204ENST00000396548 SECISBP2Q96T21 854 aaKnown RBP11.58□□□□□ -0.56
TRIM39-204ENST00000396548 TMEM43Q9BTV4 400 aa11.58□□□□□ -0.56
TRIM39-204ENST00000396548 SNTA1Q13424 505 aa11.58□□□□□ -0.56
TRIM39-204ENST00000396548 CBFBQ13951 182 aa11.58□□□□□ -0.56
TRIM39-204ENST00000396548 ZNF620Q6ZNG0 422 aa11.58□□□□□ -0.56
TRIM39-204ENST00000396548 ZNF786Q8N393 782 aa11.58□□□□□ -0.56
TRIM39-204ENST00000396548 B4GALNT2Q8NHY0 566 aa11.58□□□□□ -0.56
TRIM39-204ENST00000396548 BPIFA2Q96DR5 249 aa11.58□□□□□ -0.56
TRIM39-204ENST00000396548 SH3YL1Q96HL8 342 aaPredicted RBP11.58□□□□□ -0.56
TRIM39-204ENST00000396548 SLC19A3Q9BZV2 496 aa11.58□□□□□ -0.56
TRIM39-204ENST00000396548 MED31Q9Y3C7 131 aa11.58□□□□□ -0.56
TRIM39-204ENST00000396548 ANKUB1A6NFN9 424 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 PNMTP11086 282 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 LIFP15018 202 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 FUT1P19526 365 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 SUMO3P55854 103 aaPredicted RBP11.57□□□□□ -0.56
TRIM39-204ENST00000396548 CXCR4P61073 352 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 TGIF1Q15583 401 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 COL28A1Q2UY09 1125 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 ZNF468Q5VIY5 522 aaPredicted RBP11.57□□□□□ -0.56
TRIM39-204ENST00000396548 BROXQ5VW32 411 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 SLC46A3Q7Z3Q1 461 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 ZNF227Q86WZ6 799 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 BRIX1Q8TDN6 353 aaKnown RBP11.57□□□□□ -0.56
TRIM39-204ENST00000396548 PAQR8Q8TEZ7 354 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 LIPHQ8WWY8 451 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 PAK1IP1Q9NWT1 392 aaPredicted RBP11.57□□□□□ -0.56
TRIM39-204ENST00000396548 GVINP1Q7Z2Y8 2422 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 C2orf72A6NCS6 295 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 GIPRP48546 466 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 SSR4P51571 173 aa11.57□□□□□ -0.56
TRIM39-204ENST00000396548 COPZ1P61923 177 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms