RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 ANXA9O76027 345 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 HLA-DRAP01903 254 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 IFNW1P05000 195 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 GSTA1P08263 222 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 UBTFL1P0CB47 393 aaPredicted RBP4.35□□□□□ -1.71
GABPB1-204ENST00000396464 TRIM49P0CI25 452 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 TRIM49CP0CI26 452 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 RD3LP0DJH9 198 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 CHRNB1P11230 501 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 MLNP12872 115 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 NR2C1P13056 603 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 HOXB2P14652 356 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 CAPN2P17655 700 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 XRCC1P18887 633 aaPredicted RBP4.35□□□□□ -1.71
GABPB1-204ENST00000396464 MAGP20916 626 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 CA4P22748 312 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 PRDX3P30048 256 aaKnown RBP4.35□□□□□ -1.71
GABPB1-204ENST00000396464 AQP2P41181 271 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 PKNOX1P55347 436 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 CDKL1Q00532 357 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 HSF1Q00613 529 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 MFAP5Q13361 173 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 GRB7Q14451 532 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 RBM39Q14498 530 aaKnown RBP4.35□□□□□ -1.71
GABPB1-204ENST00000396464 ZNF77Q15935 545 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 HLA-BQ31612 363 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 DMRTC1Q5HYR2 192 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 TCEAL6Q6IPX3 200 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 SHC4Q6S5L8 630 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 MBOAT1Q6ZNC8 495 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 UTS2BQ765I0 119 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 HDDC2Q7Z4H3 204 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 SLC35F2Q8IXU6 374 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 SYS1Q8N2H4 156 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 CLIP4Q8N3C7 705 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 CCDC185Q8N715 623 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 KBTBD3Q8NAB2 608 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 OR4F6Q8NGB9 312 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 OR5M9Q8NGP3 310 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 OR52N5Q8NH56 324 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 OLIG1Q8TAK6 271 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 CNIH3Q8TBE1 160 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 TMEM255BQ8WV15 326 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 PHLDA1Q8WV24 401 aaPredicted RBP4.35□□□□□ -1.71
GABPB1-204ENST00000396464 SORCS1Q8WY21 1168 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 NSMCE3Q96MG7 304 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 SELENOSQ9BQE4 189 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 SH2D3AQ9BRG2 576 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 APOOQ9BUR5 198 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 DERL2Q9GZP9 239 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 SRRQ9GZT4 340 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 MED4Q9NPJ6 270 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 DCAF13Q9NV06 445 aaKnown RBP4.35□□□□□ -1.71
GABPB1-204ENST00000396464 GPATCH2LQ9NWQ4 482 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 ZDHHC2Q9UIJ5 367 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 ZNF221Q9UK13 617 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 FBXL4Q9UKA2 621 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 LRRC42Q9Y546 428 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 TSSC4Q9Y5U2 329 aaPredicted RBP4.35□□□□□ -1.71
GABPB1-204ENST00000396464 ALG6Q9Y672 507 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 POLR3AO14802 1390 aaPredicted RBP4.35□□□□□ -1.71
GABPB1-204ENST00000396464 FGD5Q6ZNL6 1462 aa4.35□□□□□ -1.71
GABPB1-204ENST00000396464 A0A0A6YYH2 397 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 A0A0G2JK05 382 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 hDV102S1A0JD36 115 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 WDR91A4D1P6 747 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 CLEC18AA5D8T8 446 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 OR6C70A6NIJ9 312 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 A6NJ64 397 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 MSH4O15457 936 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 XRCC2O43543 280 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 ITM2AO43736 263 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 FADS2O95864 444 aaKnown RBP4.34□□□□□ -1.71
GABPB1-204ENST00000396464 SP1P08047 785 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 SERPINA6P08185 405 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 HOXC6P09630 235 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 OCMP0CE72 109 aaPredicted RBP4.34□□□□□ -1.71
GABPB1-204ENST00000396464 TEAD1P28347 426 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 PDHA2P29803 388 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 CCKBRP32239 447 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 HSPA2P54652 639 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 TMEM50BP56557 158 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 ARPC4P59998 168 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 NTHL1P78549 312 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 ORC2Q13416 577 aaPredicted RBP4.34□□□□□ -1.71
GABPB1-204ENST00000396464 TRAM2Q15035 370 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 EZH2Q15910 746 aaKnown RBP4.34□□□□□ -1.71
GABPB1-204ENST00000396464 SLC15A2Q16348 729 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 TNXAQ16473 311 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 C3AR1Q16581 482 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 KLHL38Q2WGJ6 581 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 FAM153CQ494X1 144 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 REEP3Q6NUK4 255 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 CLEC18BQ6UXF7 455 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 RFPL4BQ6ZWI9 263 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 APRG1Q8IVJ8 170 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 GPALPP1Q8IXQ4 340 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 BOD1L2Q8IYS8 172 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 TRAM1L1Q8N609 369 aa4.34□□□□□ -1.71
GABPB1-204ENST00000396464 CLEC18CQ8NCF0 446 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms