RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 TMPRSS13Q9BYE2 586 aa11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 SLC35C2Q9NQQ7 365 aa11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 FARSBQ9NSD9 589 aaKnown RBP11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 MRTO4Q9UKD2 239 aaKnown RBP11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 AMDHD2Q9Y303 409 aa11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 COL7A1Q02388 2944 aa11.85□□□□□ -0.51
VCPKMT-201ENST00000395859 A0A1W2PNR3 127 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 TMEM129A0AVI4 362 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 CCT8L1PA6NM43 557 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 GJE1A6NN92 205 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 ZNF716A6NP11 495 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 CXorf49A8MYA2 514 aaPredicted RBP11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 LYNX1G3V0Z9 82 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 ETV2O00321 342 aaPredicted RBP11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 RIPK2O43353 540 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 IL3P08700 152 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 MYZAPP0CAP1 466 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 LYNX1P0DP58 116 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 GAAP10253 952 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 RFX3P48380 749 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 LMO4P61968 165 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 SLC29A2Q14542 456 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 FASTKD3Q14CZ7 662 aaKnown RBP11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 PDK3Q15120 406 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 PFKFB4Q16877 469 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 GGTA1PQ4G0N0 100 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 AGBL2Q5U5Z8 902 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 CYS1Q717R9 158 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 CARM1Q86X55 608 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 GSPT2Q8IYD1 628 aaKnown RBP11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 ZBED8Q8IZ13 594 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 ARFGAP2Q8N6H7 521 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 GATSQ8NAP1 163 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 ZNF527Q8NB42 609 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 TOR1AIP2Q8NFQ8 470 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 OR51F2Q8NH61 342 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 FBXO27Q8NI29 283 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 RHEBL1Q8TAI7 183 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 UBASH3BQ8TF42 649 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 DVL3Q92997 716 aaPredicted RBP11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 EXOSC8Q96B26 276 aaKnown RBP11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 SH3YL1Q96HL8 342 aaPredicted RBP11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 ZIM3Q96PE6 472 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 RBBP8Q99708 897 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 NOL11Q9H8H0 719 aaKnown RBP11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 NMRAL1Q9HBL8 299 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 LPAR2Q9HBW0 351 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 PFDN4Q9NQP4 134 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 ASB6Q9NWX5 421 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 TXNDC16Q9P2K2 825 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 MCM8Q9UJA3 840 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 FBXO9Q9UK97 447 aaPredicted RBP11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 ACTL7BQ9Y614 415 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 RYR2Q92736 4967 aa11.84□□□□□ -0.51
VCPKMT-201ENST00000395859 TRAV20A0A0B4J274 112 aa11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 IGHV1-18A0A0C4DH31 117 aa11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 A0A1W2PQD3 144 aa11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 SLITRK5O94991 958 aa11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 TFP02787 698 aa11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 PRTN3P24158 256 aa11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 TYK2P29597 1187 aa11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 MAGEA4P43358 317 aa11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 RAE1P78406 368 aaKnown RBP11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 IL13RA1P78552 427 aa11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 IFFO1Q0D2I5 559 aa11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 FAM219BQ5XKK7 198 aa11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 FAHD2BQ6P2I3 314 aaPredicted RBP11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 SPATA19Q7Z5L4 167 aa11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 MISPQ8IVT2 679 aa11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 CENPLQ8N0S6 344 aaPredicted RBP11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 C1orf52Q8N6N3 182 aaKnown RBP11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 B4GALNT2Q8NHY0 566 aa11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 RNF217Q8TC41 542 aa11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 PIK3R3Q92569 461 aa11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 FAHD2AQ96GK7 314 aa11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 BRF2Q9HAW0 419 aa11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 NTN4Q9HB63 628 aa11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 DDX28Q9NUL7 540 aaKnown RBP11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 PDP1Q9P0J1 537 aaPredicted RBP11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 DCTN4Q9UJW0 460 aa11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 SLC12A4Q9UP95 1085 aa11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 PPIAL4AQ9Y536 164 aa11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 DYNC2H1Q8NCM8 4307 aaKnown RBP11.83□□□□□ -0.52
VCPKMT-201ENST00000395859 SACSQ9NZJ4 4579 aa11.82□□□□□ -0.52
VCPKMT-201ENST00000395859 A0A087WUV0 522 aaPredicted RBP11.82□□□□□ -0.52
VCPKMT-201ENST00000395859 OIP5O43482 229 aa11.82□□□□□ -0.52
VCPKMT-201ENST00000395859 NKX2-2O95096 273 aa11.82□□□□□ -0.52
VCPKMT-201ENST00000395859 H6PDO95479 791 aa11.82□□□□□ -0.52
VCPKMT-201ENST00000395859 BCL10O95999 233 aa11.82□□□□□ -0.52
VCPKMT-201ENST00000395859 PDYNP01213 254 aa11.82□□□□□ -0.52
VCPKMT-201ENST00000395859 DDX5P17844 614 aaKnown RBP11.82□□□□□ -0.52
VCPKMT-201ENST00000395859 GABRA3P34903 492 aa11.82□□□□□ -0.52
VCPKMT-201ENST00000395859 MPIP34949 423 aa11.82□□□□□ -0.52
VCPKMT-201ENST00000395859 ZNF117Q03924 483 aa11.82□□□□□ -0.52
VCPKMT-201ENST00000395859 TOMM34Q15785 309 aaPredicted RBP11.82□□□□□ -0.52
VCPKMT-201ENST00000395859 UAP1Q16222 522 aaPredicted RBP11.82□□□□□ -0.52
VCPKMT-201ENST00000395859 SLC25A53Q5H9E4 307 aa11.82□□□□□ -0.52
VCPKMT-201ENST00000395859 TMEM107Q6UX40 140 aa11.82□□□□□ -0.52
VCPKMT-201ENST00000395859 OR52E4Q8NGH9 312 aa11.82□□□□□ -0.52
VCPKMT-201ENST00000395859 APH1AQ96BI3 265 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms