RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 FCRLAQ7L513 359 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 OLIG3Q7RTU3 272 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 ZNF550Q7Z398 422 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 ARFGAP2Q8N6H7 521 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 GOLGA6L1Q8N7Z2 621 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 RNF128Q8TEB7 428 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 MBD6Q96DN6 1003 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 PIK3IP1Q96FE7 263 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 TRNT1Q96Q11 434 aaKnown RBP12.28□□□□□ -0.44
CXCL12-205ENST00000395794 ALPK1Q96QP1 1244 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 OR5B2Q96R09 309 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 INPP5KQ9BT40 448 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 CXXC4Q9H2H0 198 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 RMND5AQ9H871 391 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 GP6Q9HCN6 339 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 KCNE5Q9UJ90 142 aa12.28□□□□□ -0.44
CXCL12-205ENST00000395794 HMGN4O00479 90 aa12.27□□□□□ -0.45
CXCL12-205ENST00000395794 UBDO15205 165 aa12.27□□□□□ -0.45
CXCL12-205ENST00000395794 ATE1O95260 518 aa12.27□□□□□ -0.45
CXCL12-205ENST00000395794 H6PDO95479 791 aa12.27□□□□□ -0.45
CXCL12-205ENST00000395794 GSNP06396 782 aa12.27□□□□□ -0.45
CXCL12-205ENST00000395794 NR2F1P10589 423 aa12.27□□□□□ -0.45
CXCL12-205ENST00000395794 TFPIP10646 304 aa12.27□□□□□ -0.45
CXCL12-205ENST00000395794 ENPP1P22413 925 aa12.27□□□□□ -0.45
CXCL12-205ENST00000395794 IL12AP29459 219 aa12.27□□□□□ -0.45
CXCL12-205ENST00000395794 RYKP34925 604 aa12.27□□□□□ -0.45
CXCL12-205ENST00000395794 MAGEA8P43361 318 aa12.27□□□□□ -0.45
CXCL12-205ENST00000395794 SESN3P58005 492 aa12.27□□□□□ -0.45
CXCL12-205ENST00000395794 CSNK2A1P68400 391 aaPredicted RBP12.27□□□□□ -0.45
CXCL12-205ENST00000395794 KCNJ10P78508 379 aa12.27□□□□□ -0.45
CXCL12-205ENST00000395794 CHRNEQ04844 493 aa12.27□□□□□ -0.45
CXCL12-205ENST00000395794 MAPK14Q16539 360 aa12.27□□□□□ -0.45
CXCL12-205ENST00000395794 DEFB113Q30KQ7 82 aa12.27□□□□□ -0.45
CXCL12-205ENST00000395794 FRRS1Q6ZNA5 592 aa12.27□□□□□ -0.45
CXCL12-205ENST00000395794 MIER2Q8N344 545 aa12.27□□□□□ -0.45
CXCL12-205ENST00000395794 ABHD3Q8WU67 409 aa12.27□□□□□ -0.45
CXCL12-205ENST00000395794 SLC25A43Q8WUT9 341 aaPredicted RBP12.27□□□□□ -0.45
CXCL12-205ENST00000395794 ZNF75CPQ92670 426 aaPredicted RBP12.27□□□□□ -0.45
CXCL12-205ENST00000395794 SRXN1Q9BYN0 137 aa12.27□□□□□ -0.45
CXCL12-205ENST00000395794 SAP130Q9H0E3 1048 aa12.27□□□□□ -0.45
CXCL12-205ENST00000395794 QRSL1Q9H0R6 528 aaKnown RBP12.27□□□□□ -0.45
CXCL12-205ENST00000395794 MTHFD2LQ9H903 347 aaPredicted RBP12.27□□□□□ -0.45
CXCL12-205ENST00000395794 CACYBPQ9HB71 228 aaKnown RBP12.27□□□□□ -0.45
CXCL12-205ENST00000395794 ACER3Q9NUN7 267 aa12.27□□□□□ -0.45
CXCL12-205ENST00000395794 ZIM2Q9NZV7 527 aa12.27□□□□□ -0.45
CXCL12-205ENST00000395794 KLHL9Q9P2J3 617 aa12.27□□□□□ -0.45
CXCL12-205ENST00000395794 KLHL13Q9P2N7 655 aa12.27□□□□□ -0.45
CXCL12-205ENST00000395794 GPR52Q9Y2T5 361 aa12.27□□□□□ -0.45
CXCL12-205ENST00000395794 CENPVL1A0A0U1RR11 272 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 A0A1W2PNR3 127 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 TMEM247A6NEH6 219 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 ETV2O00321 342 aaPredicted RBP12.26□□□□□ -0.45
CXCL12-205ENST00000395794 DNAJA2O60884 412 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 YES1P07947 543 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 CD99P14209 185 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 UQCRBP14927 111 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 FKBP2P26885 142 aaKnown RBP12.26□□□□□ -0.45
CXCL12-205ENST00000395794 CCKARP32238 428 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 PGM1P36871 562 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 APOBEC1P41238 236 aaKnown RBP12.26□□□□□ -0.45
CXCL12-205ENST00000395794 CDKN2CP42773 168 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 STX1BP61266 288 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 SLC9B1Q4ZJI4 515 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 AP1ARQ63HQ0 302 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 STAC2Q6ZMT1 411 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 LRRC74BQ6ZQY2 392 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 PLEKHM3Q6ZWE6 761 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 TUSC5Q8IXB3 177 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 CMIPQ8IY22 773 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 STEAP2Q8NFT2 490 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 PNPT1Q8TCS8 783 aaKnown RBP12.26□□□□□ -0.45
CXCL12-205ENST00000395794 LRRC8CQ8TDW0 803 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 DYDC1Q8WWB3 177 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 PMM1Q92871 262 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 ZHX1-C8orf76Q96EF9 292 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 ITCHQ96J02 903 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 MAELQ96JY0 434 aaKnown RBP12.26□□□□□ -0.45
CXCL12-205ENST00000395794 MARK4Q96L34 752 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 HDHD5Q9BXW7 423 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 EXOSC3Q9NQT5 275 aaKnown RBP12.26□□□□□ -0.45
CXCL12-205ENST00000395794 SDR39U1Q9NRG7 319 aaPredicted RBP12.26□□□□□ -0.45
CXCL12-205ENST00000395794 USH1CQ9Y6N9 552 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 MED12LQ86YW9 2145 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 CELSR1Q9NYQ6 3014 aa12.26□□□□□ -0.45
CXCL12-205ENST00000395794 DEFB108AA8MXU0 73 aa12.25□□□□□ -0.45
CXCL12-205ENST00000395794 SULT2B1O00204 365 aa12.25□□□□□ -0.45
CXCL12-205ENST00000395794 IL7RP16871 459 aa12.25□□□□□ -0.45
CXCL12-205ENST00000395794 FPR1P21462 350 aa12.25□□□□□ -0.45
CXCL12-205ENST00000395794 IL32P24001 234 aa12.25□□□□□ -0.45
CXCL12-205ENST00000395794 CRATP43155 626 aa12.25□□□□□ -0.45
CXCL12-205ENST00000395794 HTR3AP46098 478 aa12.25□□□□□ -0.45
CXCL12-205ENST00000395794 POLR2JP52435 117 aaKnown RBP12.25□□□□□ -0.45
CXCL12-205ENST00000395794 RASGEF1BQ0VAM2 473 aa12.25□□□□□ -0.45
CXCL12-205ENST00000395794 FUT5Q11128 374 aa12.25□□□□□ -0.45
CXCL12-205ENST00000395794 SYPL1Q16563 259 aa12.25□□□□□ -0.45
CXCL12-205ENST00000395794 SYT14P1Q58G82 188 aa12.25□□□□□ -0.45
CXCL12-205ENST00000395794 C6orf10Q5SRN2 563 aa12.25□□□□□ -0.45
CXCL12-205ENST00000395794 DNAJC14Q6Y2X3 702 aaPredicted RBP12.25□□□□□ -0.45
CXCL12-205ENST00000395794 MSANTD1Q6ZTZ1 278 aa12.25□□□□□ -0.45
CXCL12-205ENST00000395794 GRINAQ7Z429 371 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms