RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 ATP6V1C2Q8NEY4 427 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 RFWD2Q8NHY2 731 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 CNOT9Q92600 299 aaKnown RBP7.88□□□□□ -1.15
ATG4A-205ENST00000394892 ZC3HAV1LQ96H79 300 aaKnown RBP7.88□□□□□ -1.15
ATG4A-205ENST00000394892 MRGPRX4Q96LA9 322 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 SMR3AQ99954 134 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 THUMPD3Q9BV44 507 aaKnown RBP7.88□□□□□ -1.15
ATG4A-205ENST00000394892 KLHL4Q9C0H6 718 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 SLC38A1Q9H2H9 487 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 BTNL2Q9UIR0 455 aa7.88□□□□□ -1.15
ATG4A-205ENST00000394892 GPC6Q9Y625 555 aaPredicted RBP7.88□□□□□ -1.15
ATG4A-205ENST00000394892 CCDC154A6NI56 674 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 GTPBP1O00178 669 aaKnown RBP7.87□□□□□ -1.15
ATG4A-205ENST00000394892 AP3D1O14617 1153 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 HDAC3O15379 428 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 RAMP1O60894 148 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 STX11O75558 287 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 PGRP06401 933 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 UBTFL6P0CB48 400 aaPredicted RBP7.87□□□□□ -1.15
ATG4A-205ENST00000394892 KITP10721 976 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 FCGR2AP12318 317 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 HOXB9P17482 250 aaPredicted RBP7.87□□□□□ -1.15
ATG4A-205ENST00000394892 DDX5P17844 614 aaKnown RBP7.87□□□□□ -1.15
ATG4A-205ENST00000394892 S100A3P33764 101 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 SLC18A1P54219 525 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 PPP2R2BQ00005 443 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 TIGD2Q4W5G0 525 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 ANXA8L1Q5VT79 327 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 HHATQ5VTY9 493 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 PLEKHM3Q6ZWE6 761 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 OR9I1Q8NGQ6 314 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 LILRB1Q8NHL6 650 aaPredicted RBP7.87□□□□□ -1.15
ATG4A-205ENST00000394892 ZFP90Q8TF47 636 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 ZNF775Q96BV0 537 aaPredicted RBP7.87□□□□□ -1.15
ATG4A-205ENST00000394892 ROPN1LQ96C74 230 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 DNAJA3Q96EY1 480 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 PIK3IP1Q96FE7 263 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 ARL5BQ96KC2 179 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 ZNF300Q96RE9 604 aaPredicted RBP7.87□□□□□ -1.15
ATG4A-205ENST00000394892 PSD2Q9BQI7 771 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 SLC35A5Q9BS91 424 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 MED18Q9BUE0 208 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 BDH2Q9BUT1 245 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 CCDC106Q9BWC9 280 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 REPIN1Q9BWE0 567 aaKnown RBP7.87□□□□□ -1.15
ATG4A-205ENST00000394892 PRRG4Q9BZD6 226 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 C12orf49Q9H741 205 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 CTPS2Q9NRF8 586 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 ACER3Q9NUN7 267 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 THAP1Q9NVV9 213 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 NDRG3Q9UGV2 375 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 MCTS1Q9ULC4 181 aaKnown RBP7.87□□□□□ -1.15
ATG4A-205ENST00000394892 CHST2Q9Y4C5 530 aa7.87□□□□□ -1.15
ATG4A-205ENST00000394892 PRR14LQ5THK1 2151 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 DNHD1Q96M86 4753 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.86□□□□□ -1.15
ATG4A-205ENST00000394892 DUXAA6NLW8 204 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 SMPD2O60906 423 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 CYP7B1O75881 506 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 SOX30O94993 753 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 SNUPNO95149 360 aaKnown RBP7.86□□□□□ -1.15
ATG4A-205ENST00000394892 SYNGR4O95473 234 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 NUDT14O95848 222 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 AK1P00568 194 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 CSTAP01040 98 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 PSMB1P20618 241 aaKnown RBP7.86□□□□□ -1.15
ATG4A-205ENST00000394892 RPS4Y1P22090 263 aaKnown RBP7.86□□□□□ -1.15
ATG4A-205ENST00000394892 ME2P23368 584 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 KCNJ5P48544 419 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 CCR4P51679 360 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 CLNS1AP54105 237 aaKnown RBP7.86□□□□□ -1.15
ATG4A-205ENST00000394892 RAC3P60763 192 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 SELENBP1Q13228 472 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 BHLHB9Q6PI77 547 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 FCRLAQ7L513 359 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.86□□□□□ -1.15
ATG4A-205ENST00000394892 SPATA19Q7Z5L4 167 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 ADGRG3Q86Y34 549 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 ZNF619Q8N2I2 560 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 C10orf111Q8N326 155 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 CIARTQ8N365 385 aaPredicted RBP7.86□□□□□ -1.15
ATG4A-205ENST00000394892 TMCO5AQ8N6Q1 288 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 TOR1AIP2Q8NFQ8 470 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 RAB3IL1Q8TBN0 382 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 PNPT1Q8TCS8 783 aaKnown RBP7.86□□□□□ -1.15
ATG4A-205ENST00000394892 PIGTQ969N2 578 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 VPS33AQ96AX1 596 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 AURKBQ96GD4 344 aaPredicted RBP7.86□□□□□ -1.15
ATG4A-205ENST00000394892 SLC39A3Q9BRY0 314 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 TMEM204Q9BSN7 226 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 OR11A1Q9GZK7 315 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 ACTR6Q9GZN1 396 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 MANSC1Q9H8J5 431 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 BCO1Q9HAY6 547 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 HHATLQ9HCP6 504 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 SLC52A3Q9NQ40 469 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 PAQR5Q9NXK6 330 aaPredicted RBP7.86□□□□□ -1.15
ATG4A-205ENST00000394892 KLHL13Q9P2N7 655 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 PRSS50Q9UI38 385 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 EMC9Q9Y3B6 208 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms