RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 DGCR2P98153 550 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 RUNX3Q13761 415 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 TMEM201Q5SNT2 666 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 COMMD7Q86VX2 200 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 OR5M3Q8NGP4 307 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 FCAMRQ8WWV6 532 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 KIAA1143Q96AT1 154 aaPredicted RBP15□□□□□ -0.01
PCDH1-203ENST00000394536 ELMOD3Q96FG2 381 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 OR14A2Q96R54 314 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 FGF20Q9NP95 211 aaPredicted RBP15□□□□□ -0.01
PCDH1-203ENST00000394536 DVL2O14641 736 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 SEMA7AO75326 666 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 F3P13726 295 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 FAUP35544 74 aaKnown RBP15□□□□□ -0.01
PCDH1-203ENST00000394536 GALK2Q01415 458 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 ATXN7L3Q14CW9 347 aaPredicted RBP15□□□□□ -0.01
PCDH1-203ENST00000394536 RPE65Q16518 533 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 DECR1Q16698 335 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 MFSD12Q6NUT3 480 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 ZNF765Q7L2R6 523 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 OR6N2Q8NGY6 317 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 OR52N1Q8NH53 320 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 HCAR2Q8TDS4 363 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 NT5DC2Q9H857 520 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 B3GAT2Q9NPZ5 323 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 PFDN2Q9UHV9 154 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 SLC35A3Q9Y2D2 325 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 SLC25A35Q3KQZ1 300 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 FCRLAQ7L513 359 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 CNN2Q99439 309 aaKnown RBP15□□□□□ -0.01
PCDH1-203ENST00000394536 C12orf4Q9NQ89 552 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 FBXL4Q9UKA2 621 aa15□□□□□ -0.01
PCDH1-203ENST00000394536 PRAMEF27A3QJZ7 478 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 SYT5O00445 386 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 PDCD5O14737 125 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 KHNYNO15037 678 aaKnown RBP14.99□□□□□ -0.01
PCDH1-203ENST00000394536 ERVK-25P63136 954 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 KIAA1211LQ6NV74 962 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 LILRA6Q6PI73 481 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 MSLNLQ96KJ4 702 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 DCLRE1CQ96SD1 692 aaKnown RBP14.99□□□□□ -0.01
PCDH1-203ENST00000394536 ASB6Q9NWX5 421 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 APOBEC3BQ9UH17 382 aaKnown RBP14.99□□□□□ -0.01
PCDH1-203ENST00000394536 LSM2Q9Y333 95 aaKnown RBP14.99□□□□□ -0.01
PCDH1-203ENST00000394536 A0A1B0GW55 424 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 CDC42EP2O14613 210 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 SLC25A12O75746 678 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 TFP02787 698 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 DUX4L2P0CJ85 424 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 DUX4L3P0CJ86 424 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 DUX4L4P0CJ87 422 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 DUX4L5P0CJ88 424 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 DUX4L6P0CJ89 424 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 DUX4L7P0CJ90 424 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 GLYR1Q49A26 553 aaPredicted RBP14.99□□□□□ -0.01
PCDH1-203ENST00000394536 LRRC37A5PQ49AS3 106 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 SFXN5Q8TD22 340 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 BCL2L10Q9HD36 194 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 DUX4Q9UBX2 424 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 SLC23A1Q9UHI7 598 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 ASB4Q9Y574 426 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 CLDN4O14493 209 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 XKRYO14609 159 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 MTNR1BP49286 362 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 RPS15AP62244 130 aaKnown RBP14.99□□□□□ -0.01
PCDH1-203ENST00000394536 ACTC1P68032 377 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 ACTA1P68133 377 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 GPM6BQ13491 265 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 LIN54Q6MZP7 749 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 ZNF836Q6ZNA1 936 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 ZNF627Q7L945 461 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 ZNF619Q8N2I2 560 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 OR5T3Q8NGG3 340 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 NSMAFQ92636 917 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 WDR34Q96EX3 536 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 ARL6Q9H0F7 186 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 ZSWIM8A7E2V4 1837 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 FAM186AA6NE01 2351 aa14.99□□□□□ -0.01
PCDH1-203ENST00000394536 C11orf98E9PRG8 122 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 SGK494L7N484 410 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 RGS13O14921 159 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 HOXB2P14652 356 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 NDUFS1P28331 727 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 ERV3-1Q14264 604 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 GAS6Q14393 721 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 ZNF628Q5EBL2 1059 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 COMTD1Q86VU5 262 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 LGALS14Q8TCE9 139 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 MYEF2Q9P2K5 600 aaKnown RBP14.98□□□□□ -0.01
PCDH1-203ENST00000394536 NUBP2Q9Y5Y2 271 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 TVP23AA6NH52 213 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 E9PI62 339 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 ARPC5O15511 151 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 PRKNO60260 465 aaPredicted RBP14.98□□□□□ -0.01
PCDH1-203ENST00000394536 OR7A10O76100 309 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 LIMS1P48059 325 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 ZNF527Q8NB42 609 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 CHST4Q8NCG5 386 aa14.98□□□□□ -0.01
PCDH1-203ENST00000394536 CNOT9Q92600 299 aaKnown RBP14.98□□□□□ -0.01
PCDH1-203ENST00000394536 NXPE2Q96DL1 559 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms